R source

#### Libraries needed

## Bioconductor
library('IRanges')
library('GenomicRanges')
library('GenomeInfoDb')

if(hg19) {
    library('biovizBase')
    library('TxDb.Hsapiens.UCSC.hg19.knownGene')
}

## CRAN
library('ggplot2')
library('grid')
library('gridExtra')
library('knitr')
library('RColorBrewer')
library('mgcv')

R message

## Loading required package: nlme
## 
## Attaching package: 'nlme'
## 
## The following object is masked from 'package:IRanges':
## 
##     collapse
## 
## This is mgcv 1.8-3. For overview type 'help("mgcv-package")'.

R source

## GitHub
library('derfinder')

## Working behind the scenes
# library('knitcitations')
# library('rmarkdown')
# library('knitrBootstrap')

#### Code setup

## For ggplot
tmp <- fullRegions
names(tmp) <- seq_len(length(tmp))
regions.df <- as.data.frame(tmp)
regions.df$width <- width(tmp)
rm(tmp)
nulls.df <- as.data.frame(fullNullSummary)

## Special subsets: need at least 3 points for a density plot
keepChr <- table(regions.df$seqnames) > 2
regions.df.plot <- subset(regions.df, seqnames %in% names(keepChr[keepChr]))

if(hasSig) {
    ## Keep only those sig
    regions.df.sig <- regions.df[idx.sig, ]
    keepChr <- table(regions.df.sig$seqnames) > 2
    regions.df.sig <- subset(regions.df.sig, seqnames %in% names(keepChr[keepChr]))
    
    if(nrow(regions.df.sig) > 0) {
        ## If there's any sig, keep those with finite areas
        if(hasArea) {
            finite.area.sig <- which(is.finite(regions.df.sig$area))
            
            regions.df.sig.area <- regions.df.sig[finite.area.sig, ]
            keepChr <- table(regions.df.sig.area$seqnames) > 2
            regions.df.sig.area <- subset(regions.df.sig.area, seqnames %in%
                names(keepChr[keepChr]))
            
            ## Save the info
            hasArea <- (nrow(regions.df.sig.area) > 0)
        }
    } else {
        hasSig <- hasArea <- FALSE
    }
}

## Get chr lengths
if(hg19) {
    data(hg19Ideogram, package = 'biovizBase')
    seqlengths(fullRegions) <- seqlengths(hg19Ideogram)[mapSeqlevels(names(seqlengths(fullRegions)),
         'UCSC')]
}

## Find which chrs are present in the data set
chrs <- levels(seqnames(fullRegions))

## Subset the fullCoverage data in case that a subset was used
colsubset <- optionsStats$colsubset
if(!is.null(fullCov) & !is.null(colsubset)) {
    fullCov <- lapply(fullCov, function(x) { x[, colsubset] })
}

## Get region coverage for the top regions
if(nBestRegions > 0) {
    if(packageVersion('derfinder') >= '0.0.60') {
        regionCoverage <- getRegionCoverage(fullCov = fullCov, 
            regions = fullRegions[seq_len(nBestRegions)],
            chrsStyle = chrsStyle, species = species,
            currentStyle = currentStyle, verbose = FALSE)
    } else {
        regionCoverage <- getRegionCoverage(fullCov = fullCov, 
            regions = fullRegions[seq_len(nBestRegions)],
            verbose = FALSE)
    }
    
    save(regionCoverage, file=file.path(workingDir, 'regionCoverage.Rdata'))
}

## Graphical setup: transcription database
if(hg19 & is.null(txdb)) {
    txdb <- TxDb.Hsapiens.UCSC.hg19.knownGene
} else {
    stopifnot(!is.null(txdb))
}

R source

p1 <- ggplot(regions.df.plot, aes(x=pvalues, colour=seqnames)) +
    geom_line(stat='density') + xlim(0, 1) +
    labs(title='Density of p-values') + xlab('p-values') +
    scale_colour_discrete(limits=chrs) + theme(legend.title=element_blank())
p1

R source

## Compare the pvalues
summary(fullRegions$pvalues)

R output

##      Min.   1st Qu.    Median      Mean   3rd Qu.      Max. 
## 0.0000002 0.0050660 0.4483000 0.4349000 0.7890000 1.0000000

R source

summary(fullRegions$qvalues)

R output

##      Min.   1st Qu.    Median      Mean   3rd Qu.      Max. 
## 0.0000217 0.0202600 0.8965000 0.6189000 1.0000000 1.0000000

R source

qtable <- lapply(c(1e-04, 0.001, 0.01, 0.025, 0.05, 0.1, 0.2, 0.3, 0.4, 0.5,
    0.6, 0.7, 0.8, 0.9, 1), function(x) {
    data.frame('Cut' = x, 'Count' = sum(fullRegions$qvalues <= x))
})
qtable <- do.call(rbind, qtable)
kable(qtable, format = 'html', align = c('c', 'c'))

Cut	Count
0.0001	38272
0.0010	114551
0.0100	183452
0.0250	198310
0.0500	207859
0.1000	218544
0.2000	237317
0.3000	254228
0.4000	271439
0.5000	289422
0.6000	307944
0.7000	328838
0.8000	354604
0.9000	392655
1.0000	779674

R source

summary(fullRegions$fwer)

R output

##    Min. 1st Qu.  Median    Mean 3rd Qu.    Max. 
##  0.0000  0.6260  1.0000  0.7678  1.0000  1.0000

R source

fwertable <- lapply(c(1e-04, 0.001, 0.01, 0.025, 0.05, 0.1, 0.2, 0.3, 0.4, 0.5,
    0.6, 0.7, 0.8, 0.9, 1), function(x) {
    data.frame('Cut' = x, 'Count' = sum(fullRegions$fwer <= x))
})
fwertable <- do.call(rbind, fwertable)
kable(fwertable, format = 'html', align = c('c', 'c'))

Cut	Count
0.0001	8902
0.0010	12376
0.0100	47888
0.0250	76732
0.0500	117054
0.1000	137577
0.2000	161727
0.3000	174284
0.4000	181682
0.5000	187388
0.6000	192784
0.7000	200076
0.8000	206550
0.9000	215071
1.0000	779674

R source

xrange <- range(log10(regions.df.plot$width))
p2a <- ggplot(regions.df.plot, aes(x=log10(width), colour=seqnames)) + 
    geom_line(stat='density') + labs(title='Density of region lengths') +
    xlab('Region width (log10)') + scale_colour_discrete(limits=chrs) +
    xlim(xrange) + theme(legend.title=element_blank())
p2b <- ggplot(regions.df.sig, aes(x=log10(width), colour=seqnames)) +
    geom_line(stat='density') +
    labs(title='Density of region lengths (significant only)') +
    xlab('Region width (log10)') + scale_colour_discrete(limits=chrs) +
    xlim(xrange) + theme(legend.title=element_blank())
grid.arrange(p2a, p2b)

R source

xrange <- range(log10(regions.df.plot$area[finite.area]))
if(inf.area > 0) {
    print(paste('Dropping', inf.area, 'due to Inf values.'))
}
p3a <- ggplot(regions.df[finite.area, ], aes(x=log10(area), colour=seqnames)) +
    geom_line(stat='density') + labs(title='Density of region areas') +
    xlab('Region area (log10)') + scale_colour_discrete(limits=chrs) +
    xlim(xrange) + theme(legend.title=element_blank())
p3b <- ggplot(regions.df.sig.area, aes(x=log10(area), colour=seqnames)) +
    geom_line(stat='density') +
    labs(title='Density of region areas (significant only)') +
    xlab('Region area (log10)') + scale_colour_discrete(limits=chrs) +
    xlim(xrange) + theme(legend.title=element_blank())
grid.arrange(p3a, p3b)

R source

p4 <- ggplot(nulls.df, aes(x=log10(width), colour=chr)) +
    geom_line(stat='density') + labs(title='Density of null region lengths') +
    xlab('Region width (log10)') + scale_colour_discrete(limits=chrs) +
    theme(legend.title=element_blank())
nulls.inf <- !is.finite(nulls.df$area)
if(sum(nulls.inf) > 0) {
    print(paste('Dropping', sum(nulls.inf), 'due to Inf values.'))
}
p5 <- ggplot(nulls.df[!nulls.inf, ], aes(x=log10(area), colour=chr)) +
    geom_line(stat='density') + labs(title='Density of null region areas') +
    xlab('Region area (log10)') + scale_colour_discrete(limits=chrs) +
    theme(legend.title=element_blank())
grid.arrange(p4, p5)

R source

xrange <- range(log2(regions.df.plot$meanCoverage))
p6a <- ggplot(regions.df.plot, aes(x=log2(meanCoverage), colour=seqnames)) +
    geom_line(stat='density') + labs(title='Density of region mean coverage') +
    xlab('Region mean coverage (log2)') + scale_colour_discrete(limits=chrs) +
    xlim(xrange) + theme(legend.title=element_blank())
p6b <- ggplot(regions.df.sig, aes(x=log2(meanCoverage), colour=seqnames)) +
    geom_line(stat='density') +
    labs(title='Density of region mean coverage (significant only)') +
    xlab('Region mean coverage (log2)') + scale_colour_discrete(limits=chrs) +
    xlim(xrange) + theme(legend.title=element_blank())
grid.arrange(p6a, p6b)

R source

for(j in grep('log2FoldChange', colnames(values(fullRegions)))) {
    ## Identify the groups
    groups <- strsplit(gsub('log2FoldChange', '',
        colnames(values(fullRegions))[j]), 'vs')[[1]]
    
    ## Calculate the mean coverage only using the 2 groups in question
    j.mean <- which(colnames(values(fullRegions)) %in% paste0('mean', groups))
    groups.n <- sapply(groups, function(x) { sum(optionsStats$groupInfo == x) })
    ma.mean.mat <- as.matrix(values(fullRegions)[, j.mean])
    ## Weighted means
    ma.mean <- drop(ma.mean.mat %*% groups.n) / sum(groups.n) +
        optionsStats$scalefac
    ma.fold2 <- drop(log2(ma.mean.mat + optionsStats$scalefac) %*% c(1, -1))
    
    ma <- data.frame(mean=ma.mean, log2FoldChange=ma.fold2)
    ma2 <- ma[is.finite(ma$log2FoldChange), ]
    fold.mean <- data.frame(foldMean=mean(ma2$log2FoldChange, na.rm=TRUE))
    
    p.ma <- ggplot(ma, aes(x=log2(mean), y=log2FoldChange)) +
        geom_point(size=1.5, alpha=1/5) + 
        ylab("Fold Change [log2(x + sf)]\nRed dashed line at mean; blue line is GAM fit: y ~ s(x, bs = 'cs')") +
        xlab(paste('Mean coverage [log2(x + sf)] using only groups', groups[1], 'and',
            groups[2])) + labs(title=paste('MA style plot:', groups[1], 'vs ', 
            groups[2])) + geom_hline(aes(yintercept=foldMean), data=fold.mean, 
            colour='#990000', linetype='dashed') +
        geom_smooth(aes(y=log2FoldChange, x=log2(mean)), data=subset(ma2,
            mean > 0), method = 'gam', formula = y ~ s(x, bs = 'cs'))
    print(p.ma)
}

R source

plotOverview(regions=fullRegions, type='qval', base_size=overviewParams$base_size, areaRel=overviewParams$areaRel, legend.position=c(0.97, 0.12))

R source

plotOverview(regions=fullRegions, annotation=fullRegions, type='annotation', base_size=overviewParams$base_size, areaRel=overviewParams$areaRel, legend.position=c(0.97, 0.12))

R source

annoReg <- table(fullRegions$region, useNA='always')
annoReg.df <- data.frame(Region=names(annoReg), Count=as.vector(annoReg))
kable(annoReg.df, format = 'html', align=rep('c', 3))

Region	Count
upstream	37005
promoter	20799
overlaps 5'	2986
inside	511271
overlaps 3'	2731
close to 3'	957
downstream	103426
covers	19
NA	100480

R source

plotOverview(regions=fullRegions[idx.sig], annotation=fullRegions[idx.sig], type='annotation', base_size=overviewParams$base_size, areaRel=overviewParams$areaRel, legend.position=c(0.97, 0.12))

R source

if(nBestRegions > 0) {
    plotRegionCoverage(regions = fullRegions, regionCoverage = regionCoverage,
        groupInfo = optionsStats$groupInfo, nearestAnnotation = regions.df,
        annotatedRegions = fullAnnotatedRegions, 
        whichRegions = seq_len(min(nBestRegions, length(fullRegions))),
        colors = NULL, scalefac = optionsStats$scalefac, ask = FALSE, 
        verbose = TRUE, txdb = txdb) 
}

R message

## 2014-12-02 14:48:25 plotRegionCoverage: extracting Tx info
## 2014-12-02 14:48:32 plotRegionCoverage: getting Tx plot info

R source

info <- do.call(rbind, lapply(fullAnnotatedRegions$countTable, function(x) { data.frame(table(x)) }))
colnames(info) <- c('Number of Overlapping States', 'Frequency')
info$State <- gsub('\\..*', '', rownames(info))
rownames(info) <- NULL
kable(info, format = 'html', align=rep('c', 4))

Number of Overlapping States	Frequency	State
0	598298	exon
1	178512	exon
2	2599	exon
3	207	exon
4	36	exon
5	11	exon
6	4	exon
7	1	exon
9	1	exon
10	2	exon
11	2	exon
13	1	exon
0	717415	intragenic
1	62209	intragenic
2	48	intragenic
3	1	intragenic
11	1	intragenic
0	700298	intron
1	75494	intron
2	3667	intron
3	161	intron
4	33	intron
5	12	intron
6	3	intron
7	2	intron
8	1	intron
10	2	intron
11	1	intron

R source

topArea <- head(regions.df, nBestRegions * 5)
topArea <- data.frame('areaRank'=order(topArea$area, decreasing=TRUE), topArea)
## Clean up -Inf, Inf if present
## More details at https://github.com/ramnathv/rCharts/issues/259
replaceInf <- function(df, colsubset=seq_len(ncol(df))) {
    for(i in colsubset) {
        inf.idx <- !is.finite(df[, i])
        if(any(inf.idx)) {
            inf.sign <- sign(df[inf.idx, i])
            df[inf.idx, i] <- inf.sign * 1e100
        }
    }
    return(df)
}
topArea <- replaceInf(topArea, grep('log2FoldChange|value|area',
    colnames(topArea)))

## Make the table
kable(topArea, format = 'html', table.attr='id="regions_table"')

areaRank	seqnames	start	end	width	strand	value	area	indexStart	indexEnd	cluster	clusterL	meanCoverage	meanNeo.F	meanNeo.A	meannotNeo.F	meannotNeo.A	meanCBC.F	meanCBC.A	log2FoldChangeNeo.AvsNeo.F	log2FoldChangenotNeo.FvsNeo.F	log2FoldChangenotNeo.AvsNeo.F	log2FoldChangeCBC.FvsNeo.F	log2FoldChangeCBC.AvsNeo.F	pvalues	significant	qvalues	significantQval	name	annotation	description	region	distance	subregion	insidedistance	exonnumber	nexons	UTR	annoStrand	geneL	codingL	fwer	significantFWER
1	chr14	24893077	24897621	4545		187.664251	852934.02	574611	579155	141	34874	0.6973813	0.0108544	0.0318703	0.0156330	0.0527227	0.0256712	15.5944514	1.5539346	0.5263142	2.2801493	1.2418761	1.048854e+01	2e-07	TRUE	2.17e-05	TRUE	CBLN3	NM_001039771 NP_001034860	overlaps 3'	overlaps 3'	1110	covers exon(s)	0	3	3	overlaps 3'UTR		2991	1265	0	TRUE
2	chrX	110537005	110544974	7970		87.921168	700731.71	4112522	4120491	1684	9549	6.9511943	16.6105767	0.2244588	14.9704039	0.1743363	8.1600645	0.0926383	-6.2095080	-0.1499890	-6.5740852	-1.0254497	-7.486277e+00	2e-07	TRUE	2.17e-05	TRUE	DCX	NM_000555 NM_001195553 NM_178151 NM_178152 NM_178153 NP_000546 NP_001182482 NP_835364 NP_835365 NP_835366 XM_005262091 XP_005262148	overlaps 3'	overlaps 3'	110486	overlaps exon upstream	0	7	7	overlaps 3'UTR		118453	108711	0	TRUE
3	chr5	150883653	150890035	6383		93.311177	595605.24	7177328	7183710	3053	92851	0.2146102	0.0073008	0.0104090	0.0425146	0.0269179	0.3125297	4.5392908	0.5116946	2.5418226	1.8824302	5.4197851	9.280187e+00	2e-07	TRUE	2.17e-05	TRUE	FAT2	NM_001447 NP_001438 XM_006714761 XP_006714824	covers exon(s)	inside	58470	covers exon(s)	0	23	23	overlaps 3'UTR		64852	63366	0	TRUE
4	chr2	5832481	5842474	9994		58.747359	587121.11	291504	301497	126	10360	4.1467823	10.2359568	0.0745228	8.3935251	0.1029761	3.4060794	0.0460846	-7.1017484	-0.2862972	-6.6351929	-1.5874620	-7.795147e+00	2e-07	TRUE	2.17e-05	TRUE	SOX11	NM_003108 NP_003099	covers	covers	0	NA	NA	NA	1	NA		8718	1325	0	TRUE
5	chr15	81598632	81606376	7745		56.752837	439550.72	4389911	4397655	2004	45749	0.0945395	0.0530953	0.0295209	0.0251745	0.0260656	0.0372539	1.3863296	-0.8468471	-1.0766177	-1.0264372	-0.5111922	4.706543e+00	2e-07	TRUE	2.17e-05	TRUE	STARD5	NM_030574 NM_181900 NP_871629 XM_006720702 XM_006720703 XP_006720765 XP_006720766	overlaps 3'	overlaps 3'	10148	overlaps exon upstream	0	5	5	overlaps 3'UTR		11517	6161	0	TRUE
6	chr1	156041802	156047477	5676		75.456878	428293.24	10097851	10103526	3995	6054	1.4279186	3.3645547	0.0264896	3.1413660	0.0363544	2.5253166	0.0963112	-6.9888482	-0.0990235	-6.5321412	-0.4139513	-5.126568e+00	2e-07	TRUE	2.17e-05	TRUE	MEX3A	NM_001093725 NP_001087194	overlaps 3'	overlaps 3'	4312	overlaps exon upstream	0	2	2	overlaps 3'UTR		9985	5424	0	TRUE
7	chr16	49311614	49315787	4174		84.431795	352418.31	3487967	3492140	1159	80903	1.0192568	0.3146428	0.1123187	0.3906727	0.1982863	6.3193966	16.6828124	-1.4861161	0.3122455	-0.6661295	4.3280001	5.728504e+00	2e-07	TRUE	2.17e-05	TRUE	CBLN1	NM_004352 NP_004343	covers	covers	0	NA	NA	NA	3	NA		3913	2061	0	TRUE
8	chr3	147124655	147131807	7153		48.168533	344549.52	7948182	7955334	3297	52751	0.7152163	0.1922199	0.0794382	0.7923677	0.3476316	7.3831114	9.0291721	-1.2748527	2.0434122	0.8548013	5.2633992	5.553764e+00	2e-07	TRUE	2.17e-05	TRUE	ZIC1	NM_003412 NP_003403	overlaps 5'	overlaps 5'	0	covers exon(s)	0	1	3	overlaps 3'UTR		7325	3438	0	TRUE
9	chr6	21593984	21600410	6427		53.314805	342654.25	1026731	1033157	455	8874	7.2928997	18.4281664	0.2519440	12.5498326	0.1991798	8.3317715	0.4405941	-6.1926659	-0.5542444	-6.5316977	-1.1452173	-5.386318e+00	2e-07	TRUE	2.17e-05	TRUE	SOX4	NM_003107 NP_003098	overlaps 3'	overlaps 3'	12	inside exon	0	1	1	overlaps 3'UTR		4877	1424	0	TRUE
10	chr16	89263583	89268071	4489		68.138021	305871.58	6249276	6253764	2226	31775	0.0516339	0.0005633	0.0016767	0.0004364	0.0023483	0.0065283	1.1675611	1.5735390	-0.3685078	2.0595002	3.5346148	1.101718e+01	2e-07	TRUE	2.17e-05	TRUE	SLC22A31	NM_001242757 NP_001229686 XM_006721145 XM_006721146 XM_006721147 XP_006721208 XP_006721209 XP_006721210	overlaps 5'	overlaps 5'	0	covers exon(s)	0	1	8	overlaps 5' UTR		4360	3151	0	TRUE
11	chr5	150921614	150925902	4289		66.971834	287242.20	7203995	7208283	3053	92851	0.2107294	0.0139835	0.0133995	0.0388649	0.0208672	0.2227559	4.4309874	-0.0615545	1.4747375	0.5775076	3.9936630	8.307756e+00	2e-07	TRUE	2.17e-05	TRUE	FAT2	NM_001447 NP_001438 XM_006714761 XP_006714824	covers exon(s)	inside	22603	covers exon(s)	0	9	23	inside transcription region		64852	63366	0	TRUE
12	chr15	93007326	93011960	4635		61.619079	285604.43	5250842	5255476	2344	8591	1.4204227	3.2247697	0.0606022	3.3438451	0.0832811	2.3383902	0.0416483	-5.7336830	0.0523119	-5.2750629	-0.4636804	-6.274794e+00	2e-07	TRUE	2.17e-05	TRUE	ST8SIA2	NM_006011 NP_006002	overlaps 3'	overlaps 3'	70186	overlaps exon upstream	0	5	5	overlaps 3'UTR		74818	70320	0	TRUE
13	chr1	168048830	168055037	6208		45.839252	284570.08	11080802	11087009	4306	15303	0.7499010	1.6905228	0.1264885	1.3473052	0.1123664	1.1186621	0.0850434	-3.7403911	-0.3273928	-3.9111875	-0.5956952	-4.313126e+00	2e-07	TRUE	2.17e-05	TRUE	GPR161	NM_001267609 NM_001267610 NM_001267611 NM_001267612 NM_001267613 NM_001267614 NM_007369 NM_153832 NP_001254538 NP_001254539 NP_001254540 NP_001254541 NP_001254542 NP_001254543 NP_722561 XM_005245055 XM_005245056 XM_005245057 XM_006711251 XM_006711252 XM_006711253 XP_005245112 XP_005245113 XP_005245114 XP_006711314 XP_006711315 XP_006711316	overlaps exon upstream	inside	51868	overlaps exon upstream	0	7	7	overlaps 3'UTR		58125	49390	0	TRUE
14	chr1	11779637	11785917	6281		45.184718	283805.21	1244262	1250542	379	23499	1.2854356	3.0178296	0.0759326	2.6252523	0.0575152	2.3970810	0.0624499	-5.3126487	-0.2010552	-5.7134230	-0.3322327	-5.594669e+00	2e-07	TRUE	2.17e-05	TRUE	DRAXIN	NM_198545 NP_940947	overlaps 3'	overlaps 3'	27856	overlaps exon upstream	0	7	7	overlaps 3'UTR		28555	13437	0	TRUE
15	chr6	33988329	33995735	7407		38.013629	281566.95	2330411	2337817	857	144560	0.1305849	0.0191305	0.0294843	0.0427423	0.0743881	0.1522255	2.2385425	0.6240718	1.1597902	1.9591968	2.9922623	6.870540e+00	2e-07	TRUE	2.17e-05	TRUE	GRM4	NM_000841 NM_001256809 NM_001256810 NM_001256811 NM_001256812 NM_001256813 NM_001256814 NM_001282847 NP_000832 NP_001243738 NP_001243740 NP_001243741 NP_001243742 NP_001269776 XM_006715071 XP_006715134 XR_427829	overlaps 3'	overlaps 3'	127664	overlaps exon upstream	0	9	9	overlaps 3'UTR		133776	132569	0	TRUE
16	chr12	64536073	64546672	10600		26.181524	277524.15	4183791	4194390	1523	19874	0.4648955	1.1668434	0.0549198	0.5219758	0.1081959	0.6095863	0.0856584	-4.4091403	-1.1605560	-3.4308925	-0.9367086	-3.767872e+00	2e-07	TRUE	2.17e-05	TRUE	SRGAP1	NM_020762 NP_065813 XM_005269042 XP_005269099 XR_245947 XR_429109	overlaps 3'	overlaps 3'	158487	overlaps exon upstream	0	21	21	overlaps 3'UTR		164027	158672	0	TRUE
17	chr3	147101817	147106648	4832		57.258110	276671.19	7928888	7933719	3297	52751	0.3358139	0.0346670	0.0285226	0.4374483	0.1433036	2.7337689	4.8659120	-0.2814574	3.6574794	2.0474414	6.3011864	7.133005e+00	2e-07	TRUE	2.17e-05	TRUE	ZIC4	NM_001168378 NM_001168379 NM_001243256 NM_032153 NP_001161850 NP_001161851 NP_001230185 NP_115529 NR_033118 NR_033119 NR_040762	overlaps 3'	overlaps 3'	17948	overlaps exon upstream	0	4	4	overlaps 3'UTR		20761	13938	0	TRUE
18	chr15	74425084	74428905	3822		71.340869	272664.80	3665834	3669655	1686	17771	6.9051692	17.2751633	0.7841211	9.8407335	0.3177998	11.1209759	0.1366167	-4.4614790	-0.8118616	-5.7644372	-0.6354160	-6.982422e+00	2e-07	TRUE	2.17e-05	TRUE	ISLR2	NM_001130136 NM_001130137 NM_001130138 NM_020851 NP_001123608 NP_001123609 NP_001123610 NP_065902	overlaps exon upstream	inside	2341	overlaps exon upstream	0	3	3	overlaps 3'UTR		6400	2237	0	TRUE
19	chr17	35283353	35289937	6585		38.301205	252213.43	3217370	3223954	1204	37636	0.0386123	0.0068513	0.0013299	0.0136097	0.0020083	0.5870682	0.5990880	-2.3650192	0.9901797	-1.7704384	6.4210018	6.450242e+00	2e-07	TRUE	2.17e-05	TRUE	LHX1	NM_005568 NP_005559	upstream	upstream	4835	NA	NA	NA	5	NA		7143	4933	0	TRUE
20	chr5	146770368	146774508	4141		60.594385	250921.35	6747014	6751154	2896	18778	15.6192454	34.2644527	2.1927954	33.1630955	2.1095210	23.6687122	0.8296402	-3.9658695	-0.0471340	-4.0217253	-0.5337314	-5.368083e+00	2e-07	TRUE	2.17e-05	TRUE	DPYSL3	NM_001197294 NM_001387 NP_001184223 NP_001378	overlaps 3'	overlaps 3'	115111	overlaps exon upstream	0	14	14	overlaps 3'UTR		119248	115823	0	TRUE
21	chr11	44950677	44956571	5895		40.676331	239786.97	2545327	2551221	1001	44876	2.1081924	4.4512045	0.6387719	2.4834017	0.6334203	2.4327304	2.2406352	-2.8008231	-0.8418781	-2.8129607	-0.8716193	-9.902880e-01	2e-07	TRUE	2.17e-05	TRUE	TP53I11	NM_001076787 NM_001258320 NM_001258321 NM_001258322 NM_001258323 NM_001258324 NM_006034 NP_001245249 NP_001245250 NP_001245251 NP_001245252 NP_001245253 NP_006025 XM_005253227 XM_005253229 XM_006718387 XP_005253284 XP_005253286 XP_006718450 XR_242833 XR_428864	overlaps 3'	overlaps 3'	16286	overlaps exon upstream	0	7	7	overlaps 3'UTR		18958	3451	0	TRUE
22	chr18	74690782	74694846	4065		58.631636	238337.60	3159188	3163252	1464	38445	56.8019705	1.5696695	92.2246590	0.7833782	136.0379623	0.3785141	41.7689947	5.8766198	-1.0026799	6.4374046	-2.0520417	4.733900e+00	2e-07	TRUE	2.17e-05	TRUE	MBP	NM_001025081 NM_001025090 NM_001025092 NM_001025094 NM_001025098 NM_001025100 NM_001025101 NM_002385 NP_001020252 NP_001020261 NP_001020263 NP_001020271 NP_001020272 NP_002376 XM_005266699 XP_005266756 XR_245459 XR_245460 XR_245461 XR_430073 XR_430074	overlaps 3'	overlaps 3'	34378	inside exon	0	4	4	3'UTR		38433	28918	0	TRUE
23	chr11	122741962	122743350	1389		169.962224	236077.53	7947322	7948710	2992	10302	0.1513672	0.0081595	0.0133507	0.0132140	0.0125183	0.0711632	3.2349436	0.7103690	0.6955244	0.6174947	3.1245837	8.631049e+00	2e-07	TRUE	2.17e-05	TRUE	CRTAM	NM_019604 NP_062550	overlaps 3'	overlaps 3'	8872	overlaps exon upstream	0	5	5	overlaps 3'UTR		10257	8990	0	TRUE
24	chr5	161128501	161129605	1105		213.071063	235443.52	7688409	7689513	3258	17564	0.4073844	0.0034941	0.0130951	0.0032514	0.0262895	0.1726490	9.1563973	1.9060261	-0.1038855	2.9114864	5.6267725	1.135564e+01	2e-07	TRUE	2.17e-05	TRUE	GABRA6	NM_000811 NP_000802	overlaps 3'	overlaps 3'	11960	overlaps exon upstream	0	3	3	overlaps 3'UTR		13057	11558	0	TRUE
25	chr1	231351038	231357310	6273		36.848990	231153.71	14774585	14780857	5835	31839	0.8816858	2.0917023	0.0727567	1.3295391	0.0783463	1.6528319	0.7191149	-4.8454537	-0.6537513	-4.7386693	-0.3397375	-1.540383e+00	2e-07	TRUE	2.17e-05	TRUE	TRIM67	NM_001004342 NP_001004342 XM_005273137 XM_005273138 XP_005273194 XP_005273195	overlaps exon upstream	inside	52364	overlaps exon upstream	0	10	10	overlaps 3'UTR		58640	52470	0	TRUE
26	chr6	90636246	90641655	5410		42.443566	229619.69	5185398	5190807	1933	6365	1.1098400	2.9716539	0.0735344	1.3043501	0.0571095	0.5975561	0.1533544	-5.3367023	-1.1879349	-5.7013925	-2.3141200	-4.276325e+00	2e-07	TRUE	2.17e-05	TRUE	BACH2	NM_001170794 NM_021813 NP_001164265 NP_068585 XM_005248758 XM_005248759 XM_006715545 XP_005248815 XP_005248816 XP_006715608	overlaps 3'	overlaps 3'	364972	inside exon	0	9	9	3'UTR		370380	76436	0	TRUE
27	chr7	155255003	155257555	2553		89.378942	228184.44	8455532	8458084	3579	46591	0.0823724	0.0012124	0.0027800	0.0031328	0.0053759	1.0956550	1.4867773	1.1972865	1.3696298	2.1486848	9.8197548	1.026015e+01	2e-07	TRUE	2.17e-05	TRUE	EN2	NM_001427 NP_001418	overlaps 3'	overlaps 3'	4179	overlaps exon upstream	0	2	2	overlaps 3'UTR		6702	4309	0	TRUE
28	chr3	57126585	57130536	3952		56.684474	224017.04	3957460	3961411	1513	16172	0.6786853	1.5105728	0.1038462	1.2759332	0.1304179	0.8675275	0.1375676	-3.8625757	-0.2435430	-3.5338819	-0.8001144	-3.456883e+00	2e-07	TRUE	2.17e-05	TRUE	IL17RD	NM_017563 NP_060033 XM_005265238 XM_006713209 XP_005265295 XP_006713272	overlaps exon upstream	inside	73795	overlaps exon upstream	0	14	14	overlaps 3'UTR		80321	13261	0	TRUE
29	chr1	23239953	23247987	8035		27.492145	220899.38	2245803	2253837	736	15509	0.4084362	0.7645714	0.1082323	0.8220019	0.0736961	2.0078183	0.0893292	-2.8205197	0.1044904	-3.3749920	1.3929055	-3.097447e+00	2e-07	TRUE	2.17e-05	TRUE	EPHB2	NM_004442 NM_017449 NP_004433 NP_059145 XM_006710441 XM_006710442 XP_006710504 XP_006710505	overlaps 3'	overlaps 3'	202621	overlaps exon upstream	0	15	15	overlaps 3'UTR		204491	202587	0	TRUE
30	chr2	162279833	162288203	8371		26.011668	217743.67	8175033	8183403	3564	26405	1.6528822	4.2540519	0.5989148	0.7139810	0.1630797	0.0172743	0.0014376	-2.8284149	-2.5748801	-4.7051889	-7.9440696	-1.153100e+01	2e-07	TRUE	2.17e-05	TRUE	TBR1	NM_006593 NP_006584	overlaps 3'	overlaps 3'	5427	overlaps exon upstream	0	5	5	overlaps 3'UTR		7167	6012	0	TRUE
31	chr1	180853139	180859409	6271		34.526712	216517.01	11833121	11839391	4672	7604	3.7171214	9.3223806	0.4773006	4.6620347	0.4933904	4.9478404	0.3078087	-4.2877283	-0.9997387	-4.2398968	-0.9138995	-4.920593e+00	2e-07	TRUE	2.17e-05	TRUE	XPR1	NM_001135669 NM_004736 NP_001129141 NP_004727	overlaps exon upstream	inside	251993	overlaps exon upstream	0	14	14	overlaps 3'UTR		258269	251864	0	TRUE
32	chr5	80707693	80716355	8663		24.602080	213127.82	3356274	3364936	1522	24986	0.9781838	2.2539952	0.3169629	0.8938961	0.2472959	0.6925324	0.4088120	-2.8300986	-1.3343055	-3.1881744	-1.7025309	-2.462975e+00	2e-07	TRUE	2.17e-05	TRUE	RNU5E-1	NR_002754	NA	NA	0	NA	NA	NA	2	NA		0	0	0	TRUE
33	chr3	147131832	147134924	3093		68.040422	210449.02	7955336	7958428	3297	52751	0.7363041	0.1610765	0.0810478	0.7974643	0.4184508	7.2209519	9.5531960	-0.9909017	2.3076737	1.3773119	5.4863709	5.890165e+00	2e-07	TRUE	2.17e-05	TRUE	ZIC1	NM_003412 NP_003403	overlaps 3'	overlaps 3'	4651	inside exon	0	3	3	3'UTR		7325	3438	0	TRUE
34	chr16	8945860	8949186	3327		62.741479	208740.90	1358707	1362033	345	10226	2.0140298	4.3060248	0.4987536	3.3400762	0.6300597	2.4815935	0.3011655	-3.1099576	-0.3664756	-2.7727962	-0.7950898	-3.837728e+00	2e-07	TRUE	2.17e-05	TRUE	CARHSP1	NM_001042476 NM_001278260 NM_001278261 NM_001278262 NM_001278263 NM_001278264 NM_001278265 NM_001278266 NM_014316 NP_001035941 NP_001265189 NP_001265190 NP_001265191 NP_001265192 NP_001265193 NP_001265194 NP_001265195 NP_055131 XM_005255228 XM_005255229 XP_005255285 XP_005255286	overlaps 3'	overlaps 3'	13683	overlaps exon upstream	0	5	5	overlaps 3'UTR		16070	4164	0	TRUE
35	chr14	59111865	59115317	3453		59.114549	204122.54	2079495	2082947	790	16402	2.9228005	8.1283603	0.2408200	2.0803167	0.1730666	1.1433234	1.1603577	-5.0769372	-1.9661612	-5.5535649	-2.8297308	-2.808395e+00	2e-07	TRUE	2.17e-05	TRUE	DACT1	NM_001079520 NM_016651 NP_001072988 NP_057735 NR_046093 NR_046095 XM_006720166 XM_006720167 XP_006720229 XP_006720230	overlaps 3'	overlaps 3'	6310	overlaps exon upstream	0	4	4	overlaps 3'UTR		9483	1667	0	TRUE
36	chr3	51428730	51435307	6578		30.946758	203567.78	3483885	3490462	1335	19253	0.9113008	1.6505408	0.3527486	1.6269072	0.3507504	1.5012327	0.5029739	-2.2262267	-0.0208069	-2.2344221	-0.1367912	-1.714383e+00	2e-07	TRUE	2.17e-05	TRUE	VPRBP	NM_001171904 NM_014703 NP_001165375 NP_055518 XM_005276751 XM_005276752 XM_005276753 XM_005276754 XM_005276755 XM_006713426 XM_006713427 XM_006713428 XP_005276808 XP_005276809 XP_005276810 XP_005276811 XP_005276812 XP_006713489 XP_006713490 XP_006713491 XR_254197 XR_254198 XR_427298 XR_427299	overlaps 3'	overlaps 3'	23144	inside exon	0	11	11	3'UTR		23178	22051	0	TRUE
37	chr2	207940097	207945990	5894		34.493299	203303.50	10565203	10571096	4647	7114	1.0444284	2.1345980	0.3116016	1.7193298	0.2288143	1.5171615	0.6296739	-2.7761898	-0.3121181	-3.2217152	-0.4925897	-1.761288e+00	2e-07	TRUE	2.17e-05	TRUE	KLF7	NM_001270942 NM_001270943 NM_001270944 NM_003709 NP_001257871 NP_001257872 NP_001257873 NP_003700 NR_073108 XM_005246926 XM_006712815 XM_006712816 XP_005246983 XP_006712878 XP_006712879	overlaps exon upstream	inside	85980	overlaps exon upstream	0	4	4	overlaps 3'UTR		93108	85929	0	TRUE
38	chr10	46998875	47007881	9007		22.118869	199224.65	2262262	2271268	1035	18341	0.2172551	0.4123332	0.0171025	0.4799011	0.0530225	0.6643936	0.3676657	-4.5915310	0.2189263	-2.9591334	0.6882274	-1.654162e-01	2e-07	TRUE	2.17e-05	TRUE	GPRIN2	NM_014696 NP_055511 XM_005270329 XM_005277666 XP_005270386 XP_005277723	overlaps 3'	overlaps 3'	5329	inside exon	0	3	3	overlaps 3'UTR		7022	1376	0	TRUE
39	chr11	113136859	113141243	4385		45.342300	198825.98	7105885	7110269	2679	20493	0.4493339	0.7562051	0.1567563	0.5490623	0.1402649	0.4524173	1.6304094	-2.2702542	-0.4618077	-2.4306240	-0.7411234	1.108385e+00	2e-07	TRUE	2.17e-05	TRUE	NCAM1	NM_000615 NM_001076682 NM_001242607 NM_001242608 NM_181351 NP_000606 NP_001070150 NP_001229536 NP_001229537 NP_851996	covers exon(s)	inside	10260	covers exon(s)	0	3	6	inside transcription region		22559	19371	0	TRUE
40	chr20	306072	310866	4795		40.597307	194664.08	19807	24601	6	19026	1.5798223	3.4586993	0.3166137	2.7624105	0.2732696	2.3015036	0.5486056	-3.4494339	-0.3243019	-3.6618326	-0.5876529	-2.656388e+00	2e-07	TRUE	2.17e-05	TRUE	SOX12	NM_006943 NP_008874	overlaps 5'	overlaps 5'	0	inside exon	0	1	1	overlaps 3'UTR		4657	947	0	TRUE
41	chr2	27169774	27174029	4256		45.564517	193922.58	1399383	1403638	639	11254	5.7377673	11.9020803	1.3643174	10.9637015	1.5538205	6.8373224	1.3005101	-3.1249625	-0.1184788	-2.9373220	-0.7997104	-3.194064e+00	2e-07	TRUE	2.17e-05	TRUE	DPYSL5	NM_001253723 NM_001253724 NM_020134 NP_001240652 NP_001240653 NP_064519	overlaps 3'	overlaps 3'	98482	overlaps exon upstream	0	13	13	overlaps 3'UTR		101927	48495	0	TRUE
42	chrY	21152514	21155021	2508		76.973595	193049.78	146761	149268	50	2508	12.6697894	29.5463446	0.9334122	26.2988419	1.0582790	16.2640664	0.2724569	-4.9843215	-0.1679804	-4.8031877	-0.8612916	-6.760808e+00	2e-07	TRUE	2.17e-05	TRUE	TTTY14	NR_001543	NA	NA	0	NA	NA	NA	2	NA		0	0	0	TRUE
43	chr12	68050886	68058348	7463		25.263923	188544.66	4368536	4375998	1621	7983	0.6614551	1.4299032	0.2172248	0.9223815	0.1577386	0.6452918	0.1254801	-2.7186566	-0.6324820	-3.1803102	-1.1478938	-3.510387e+00	2e-07	TRUE	2.17e-05	TRUE	DYRK2	NM_003583 NM_006482 NP_003574 NP_006473	overlaps 3'	overlaps 3'	8374	inside exon	0	2	2	overlaps 3'UTR		13932	1586	0	TRUE
44	chr6	87964364	87972642	8279		22.439216	185774.27	4978755	4987033	1849	11210	0.5722932	1.1268911	0.1699329	1.0257358	0.1568996	0.9726623	0.3136404	-2.7293111	-0.1356888	-2.8444346	-0.2123371	-1.845165e+00	2e-07	TRUE	2.17e-05	TRUE	ZNF292	NM_015021 NP_055836 XM_005248697 XM_005248698 XP_005248754 XP_005248755	overlaps exon upstream	inside	99095	overlaps exon upstream	0	8	8	overlaps 3'UTR		108137	106209	0	TRUE
45	chr22	31365244	31375326	10083		18.281676	184334.14	1560784	1570866	549	11521	1.0772787	1.7496803	0.5045473	1.8496235	0.5436419	2.1272034	0.9067166	-1.7940297	0.0801404	-1.6863628	0.2818666	-9.483677e-01	2e-07	TRUE	2.17e-05	TRUE	TUG1	NR_002323 NR_110492 NR_110493	NA	NA	0	NA	NA	NA	2	NA		0	0	0	TRUE
46	chr11	17793207	17804606	11400		16.060056	183084.64	1416769	1428168	520	63463	0.4166582	0.2478187	0.4196885	0.2423754	0.2812680	0.3278155	2.4683341	0.7600341	-0.0320420	0.1826606	0.4035992	3.316181e+00	2e-07	TRUE	2.17e-05	TRUE	KCNC1	NM_001112741 NM_004976 NP_001106212 NP_004967	covers	covers	0	NA	NA	NA	2	NA		3883	2288	0	TRUE
47	chr1	29443328	29448228	4901		37.355414	183078.88	2948043	2952943	1026	28349	0.4499854	0.6977607	0.0811781	0.7457282	0.1460807	1.0164308	2.0770154	-3.1035691	0.0959174	-2.2559667	0.5427076	1.573708e+00	2e-07	TRUE	2.17e-05	TRUE	TMEM200B	NM_001003682 NM_001171868 NP_001003682 NP_001165339	overlaps 3'	overlaps 3'	2193	inside exon	0	2	2	overlaps 3'UTR		4484	923	0	TRUE
48	chr1	31651869	31654562	2694		67.509299	181870.05	3050161	3052854	1069	17631	2.2245930	5.1830082	0.2582799	3.4373257	0.2013782	3.5683487	1.7963950	-4.3267824	-0.5925031	-4.6858104	-0.5385331	-1.528685e+00	2e-07	TRUE	2.17e-05	TRUE	NKAIN1	NM_024522 NP_078798	overlaps 3'	overlaps 3'	58172	overlaps exon upstream	0	7	7	overlaps 3'UTR		60142	57844	0	TRUE
49	chr11	63527366	63531494	4129		44.014065	181734.08	3713128	3717256	1364	10431	2.3193607	4.9554139	0.6582018	3.6877816	0.5162830	2.6409746	0.6963051	-2.9124038	-0.4262523	-3.2627716	-0.9079351	-2.831214e+00	2e-07	TRUE	2.17e-05	TRUE	C11orf95	NM_001144936 NP_001138408	overlaps exon upstream	inside	4619	overlaps exon upstream	0	5	5	overlaps 3'UTR		8749	5204	0	TRUE
50	chr17	21318599	21323181	4583		39.504007	181046.87	2187367	2191949	840	8362	0.2666778	0.0597858	0.2337113	0.0742388	0.2911853	0.0866313	2.5099864	1.9668514	0.3123687	2.2840615	0.5350850	5.391732e+00	2e-07	TRUE	2.17e-05	TRUE	KCNJ12	NM_021012 NP_066292 XM_005256625 XP_005256682	overlaps 3'	overlaps 3'	10151	inside exon	0	3	3	overlaps 3'UTR		14731	1301	0	TRUE
51	chr7	96592494	96605117	12624		14.273066	180183.18	4868018	4880641	2142	24345	0.4199048	0.4463116	0.0988793	2.1938457	0.0945900	0.0092621	0.0005789	-2.1743111	2.2973389	-2.2382915	-5.5905739	-9.590415e+00	2e-07	TRUE	2.17e-05	TRUE	DLX6-AS1	NR_015448	NA	NA	0	NA	NA	NA	3	NA		0	0	0	TRUE
52	chr1	160394904	160398452	3549		50.743566	180088.92	10583186	10586734	4126	13018	1.2095361	2.6963853	0.1452505	2.2891493	0.2306697	1.7252055	0.4890766	-4.2144113	-0.2362151	-3.5471261	-0.6442585	-2.462894e+00	2e-07	TRUE	2.17e-05	TRUE	VANGL2	NM_020335 NP_065068 XM_005245357 XP_005245414	overlaps exon upstream	inside	24540	overlaps exon upstream	0	8	8	overlaps 3'UTR		28104	9540	0	TRUE
53	chr1	117117018	117120189	3172		56.337010	178700.99	8563524	8566695	3464	12011	2.5094068	5.9586860	0.3147147	4.2569247	0.2933396	3.0363245	0.2118303	-4.2428778	-0.4851826	-4.3443504	-0.9726682	-4.814013e+00	2e-07	TRUE	2.17e-05	TRUE	IGSF3	NM_001007237 NM_001542 NP_001007238 NP_001533 XM_005270793 XM_005270794 XM_006710593 XP_005270850 XP_005270851 XP_006710656	overlaps 3'	overlaps 3'	90188	overlaps exon upstream	0	11	11	overlaps 3'UTR		93357	89014	0	TRUE
54	chr21	45876377	45882816	6440		27.489178	177030.30	1714751	1721190	670	53614	0.1634252	0.3838396	0.0115216	0.3156487	0.0185267	0.2757327	0.0090799	-5.0580872	-0.2821838	-4.3728266	-0.4772332	-5.401678e+00	2e-07	TRUE	2.17e-05	TRUE	LRRC3	NM_030891 NP_112153	overlaps 3'	overlaps 3'	984	overlaps exon upstream	0	2	2	overlaps 3'UTR		3346	773	0	TRUE
55	chrX	103045342	103047548	2207		79.764618	176040.51	3793263	3795469	1510	18273	38.8394521	1.3033380	60.7046507	2.2461963	97.1844948	4.3157434	30.3541731	5.5415238	0.7852727	6.2204430	1.7273978	4.541612e+00	2e-07	TRUE	2.17e-05	TRUE	PLP1	NM_000533 NM_001128834 NM_199478 NP_000524 NP_001122306 NP_955772	overlaps 3'	overlaps 3'	4303	overlaps exon upstream	0	6	6	overlaps 3'UTR		6508	4417	0	TRUE
56	chr14	74872596	74874399	1804		97.534443	175952.13	3245866	3247669	1314	13493	1.4028020	0.0959158	0.1241637	0.9830513	9.2168823	0.1022870	0.1897899	0.3724040	3.3574267	6.5863669	0.0927826	9.845631e-01	2e-07	TRUE	2.17e-05	TRUE	SYNDIG1L	NM_001105579 NP_001099049	overlaps exon upstream	inside	18406	overlaps exon upstream	0	4	4	overlaps 3'UTR		20209	2209	0	TRUE
57	chrX	71364132	71373137	9006		19.159620	172551.54	2679584	2688589	1169	16071	0.1041219	0.0238448	0.0747448	0.0552227	0.1799292	0.1607086	0.8202036	1.6482991	1.2115860	2.9156832	2.7527006	5.104236e+00	2e-07	TRUE	2.17e-05	TRUE	FLJ44635	NM_207422 NP_997305	overlaps exon downstream	inside	98	overlaps exon downstream	0	1	2	overlaps 5' UTR		17566	15720	0	TRUE
58	chr12	23679947	23687459	7513		22.878240	171884.22	1574232	1581744	627	19418	1.1298746	3.1141059	0.1682891	0.7395942	0.1190567	0.1976751	0.0388790	-4.2098042	-2.0740121	-4.7090973	-3.9776151	-6.323682e+00	2e-07	TRUE	2.17e-05	TRUE	SOX5	NM_001261414 NM_001261415 NM_006940 NM_152989 NM_178010 NP_001248343 NP_001248344 NP_008871 NP_694534 NP_821078 XM_006719149 XM_006719150 XP_006719212 XP_006719213	overlaps 3'	overlaps 3'	1027924	overlaps exon upstream	0	17	17	overlaps 3'UTR		1030152	361804	0	TRUE
59	chr5	150945230	150948514	3285		51.950499	170657.39	7214225	7217509	3054	9324	0.1221449	0.0039226	0.0055102	0.0167183	0.0103331	0.1029293	2.6473494	0.4902969	2.0915583	1.3974095	4.7137127	9.398535e+00	2e-07	TRUE	2.17e-05	TRUE	FAT2	NM_001447 NP_001438 XM_006714761 XP_006714824	overlaps 5'	overlaps 5'	0	overlaps exon downstream	0	1	3	overlaps 5' UTR		12684	12662	0	TRUE
60	chr1	15438298	15444541	6244		27.035439	168809.28	1463411	1469654	446	20603	0.6242033	1.2678135	0.2328862	0.4324111	0.2942776	0.6429713	1.0577418	-2.4446452	-1.5518669	-2.1070928	-0.9795162	-2.613551e-01	2e-07	TRUE	2.17e-05	TRUE	KAZN	NM_001017999 NM_001018000 NM_001018001 NM_015209 NM_201628 NP_001017999 NP_001018000 NP_001018001 NP_056024 NP_963922 XM_005245795 XM_005245796 XP_005245852 XP_005245853	covers exon(s)	inside	10594	covers exon(s)	0	5	5	overlaps 3'UTR		16840	12980	0	TRUE
61	chr1	94017450	94020199	2750		61.331784	168662.41	7226385	7229134	2917	26975	2.4141531	4.9865277	0.4000459	5.1699646	0.5692718	4.8415751	0.5488287	-3.6397982	0.0521189	-3.1308461	-0.0425591	-3.183608e+00	2e-07	TRUE	2.17e-05	TRUE	FNBP1L	NM_001024948 NM_001164473 NM_017737 NP_001020119 NP_001157945 NP_060207 XM_006710707 XP_006710770	overlaps exon upstream	inside	7786	overlaps exon upstream	0	6	6	overlaps 3'UTR		10554	5558	0	TRUE
62	chr5	82832824	82838089	5266		32.015738	168594.87	3447060	3452325	1566	12352	1.1186913	2.5138601	0.0420999	2.7342843	0.0629315	1.3985937	0.1818201	-5.8999430	0.1212589	-5.3199786	-0.8459275	-3.789321e+00	2e-07	TRUE	2.17e-05	TRUE	VCAN	NM_001126336 NM_001164097 NM_001164098 NM_004385 NP_001119808 NP_001157569 NP_001157570 NP_004376	overlaps exon downstream	inside	1391	overlaps exon downstream	0	1	8	overlaps 5' UTR		46689	43422	0	TRUE
63	chr16	28331391	28335171	3781		43.700093	165230.05	2679856	2683636	920	11429	3.7044604	7.6418762	0.8482141	6.6200810	0.5495419	7.0729671	3.0541899	-3.1714265	-0.2070780	-3.7976256	-0.1116113	-1.323137e+00	2e-07	TRUE	2.17e-05	TRUE	SBK1	NM_001024401 NP_001019572 XM_005255315 XP_005255372	overlaps 3'	overlaps 3'	27551	overlaps exon upstream	0	4	4	overlaps 3'UTR		31330	3529	0	TRUE
64	chr3	57124011	57126455	2445		67.098110	164054.88	3954996	3957440	1513	16172	0.9645079	2.0389600	0.1987746	1.8364995	0.2533905	1.2200824	0.2404682	-3.3586282	-0.1508749	-3.0083993	-0.7408549	-3.083915e+00	2e-07	TRUE	2.17e-05	TRUE	IL17RD	NM_017563 NP_060033 XM_005265238 XM_006713209 XP_005265295 XP_006713272	inside exon	inside	77876	inside exon	0	14	14	3'UTR		80321	13261	0	TRUE
65	chr20	30585903	30591176	5274		31.089030	163963.54	1693508	1698781	668	79128	0.4417409	0.8433418	0.1063203	0.6349639	0.0592381	1.3349036	1.0354594	-2.9876998	-0.4094428	-3.8315202	0.6625462	2.960817e-01	2e-07	TRUE	2.17e-05	TRUE	XKR7	NM_001011718 NP_001011718	overlaps 3'	overlaps 3'	30098	inside exon	0	3	3	3'UTR		30451	29281	0	TRUE
66	chr3	38527204	38534613	7410		22.033554	163268.63	2123082	2130491	859	15837	0.4460963	0.8457679	0.1175024	0.9214715	0.1253066	0.8944932	0.2658985	-2.8475720	0.1236777	-2.7547996	0.0808087	-1.669386e+00	2e-07	TRUE	2.17e-05	TRUE	ACVR2B	NM_001106 NP_001097 XM_005265583 XP_005265640	inside exon	inside	31414	inside exon	0	10	10	3'UTR		38843	4852	0	TRUE
67	chr6	30652184	30655616	3433		47.436273	162848.72	1792040	1795472	734	6581	0.6710742	1.4973639	0.1118438	1.2201385	0.1107636	0.9987991	0.1341806	-3.7428680	-0.2953800	-3.7568692	-0.5841585	-3.480177e+00	2e-07	TRUE	2.17e-05	TRUE	PPP1R18	NM_001134870 NM_133471 NP_001128342 NP_597728 XM_003403597 XP_003403645	overlaps exon downstream	inside	56	overlaps exon downstream	0	1	3	overlaps 5' UTR		11506	8749	0	TRUE
68	chr8	70579285	70585564	6280		25.909308	162710.45	3710570	3716849	1461	6280	0.1848331	0.4342701	0.0089907	0.3915342	0.0127638	0.2674584	0.0022088	-5.5940139	-0.1494546	-5.0884647	-0.6992784	-7.619169e+00	2e-07	TRUE	2.17e-05	TRUE	SLCO5A1	NM_001146008 NM_001146009 NM_030958 NP_001139480 NP_001139481 NP_112220 XM_005251313 XP_005251370 XR_428341	overlaps 3'	overlaps 3'	161735	overlaps exon upstream	0	10	10	overlaps 3'UTR		162731	159804	0	TRUE
69	chr10	131633549	131636228	2680		60.632681	162495.59	7023887	7026566	3097	15132	0.1279395	0.0655750	0.0057201	0.0957899	0.0078024	6.3106413	0.0829321	-3.5190217	0.5467268	-3.0711540	6.5884964	3.387847e-01	2e-07	TRUE	2.17e-05	TRUE	EBF3	NM_001005463 NP_001005463 XM_005252667 XM_005252668 XM_005252669 XM_006717739 XM_006717740 XM_006717741 XM_006717742 XM_006717743 XM_006717744 XP_005252724 XP_005252725 XP_005252726 XP_006717802 XP_006717803 XP_006717804 XP_006717805 XP_006717806 XP_006717807 XR_428703	overlaps exon upstream	inside	125863	overlaps exon upstream	0	16	16	overlaps 3'UTR		128595	125839	0	TRUE
70	chr12	3390896	3395728	4833		33.544002	162118.16	299093	303925	115	10472	0.5501054	0.3180562	0.2843787	1.2407786	0.3212894	1.6091100	3.3277974	-0.1614682	1.9638922	0.0145918	2.3389094	3.387214e+00	2e-07	TRUE	2.17e-05	TRUE	TSPAN9	NM_001168320 NM_006675 NP_001161792 NP_006666 XM_006718956 XM_006718957 XP_006719019 XP_006719020	covers exon(s)	inside	204375	covers exon(s)	0	8	8	overlaps 3'UTR		209209	81922	0	TRUE
71	chr11	56954716	56959166	4451		36.215529	161195.32	3025787	3030237	1166	11746	0.8517821	1.7197481	0.2161733	1.7959721	0.2405384	0.7818824	0.0453440	-2.9919367	0.0625677	-2.8378582	-1.1371737	-5.245141e+00	2e-07	TRUE	2.17e-05	TRUE	LRRC55	NM_001005210 NP_001005210	overlaps exon upstream	inside	5495	overlaps exon upstream	0	2	2	overlaps 3'UTR		9967	5586	0	TRUE
72	chr17	42875814	42883206	7393		21.647129	160037.23	4302910	4310302	1559	9027	0.3269032	0.7363582	0.0761285	0.3889503	0.0843820	0.4451230	0.2364841	-3.2738986	-0.9208218	-3.1254014	-0.7262037	-1.638665e+00	2e-07	TRUE	2.17e-05	TRUE	GJC1	NM_001080383 NM_005497 NP_001073852 NP_005488 XM_005256920 XM_005256921 XP_005256977 XP_005256978	overlaps 3'	overlaps 3'	24973	overlaps exon upstream	0	3	3	overlaps 5' UTR		32363	1190	0	TRUE
73	chr1	163112109	163117298	5190		30.737073	159525.41	10804467	10809656	4193	5190	1.4716968	0.2707063	2.5560412	0.2712356	2.1774511	0.2727019	1.3059486	3.2391107	0.0028182	3.0078399	0.0105962	2.270298e+00	2e-07	TRUE	2.17e-05	TRUE	RGS5	NM_001195303 NM_001254748 NM_001254749 NM_003617 NM_025226 NP_001182232 NP_001241677 NP_001241678 NP_003608 NR_045630	overlaps exon upstream	inside	174283	overlaps exon upstream	0	6	6	overlaps 3'UTR		179492	5267	0	TRUE
74	chr8	134047565	134050987	3423		46.250248	158314.60	6165976	6169398	2594	23216	2.6934514	7.7398963	0.2283525	1.3895909	0.2630726	1.2301699	0.1236906	-5.0829796	-2.4776540	-4.8787816	-2.6534567	-5.967507e+00	2e-07	TRUE	2.17e-05	TRUE	TG	NM_003235 NP_003226 XM_005251038 XM_005251040 XM_005251042 XM_005251043 XM_006716622 XM_006716623 XP_005251095 XP_005251097 XP_005251099 XP_005251100 XP_006716685 XP_006716686	inside intron	inside	70713	inside intron	-5297	12	19	inside transcription region		170291	169869	0	TRUE
75	chr14	95648281	95658086	9806		16.128071	158151.87	4532887	4542692	1869	17048	0.1091046	0.0116298	0.1073284	0.0229297	0.3942313	0.0656146	0.1811388	3.2061350	0.9793936	5.0831454	2.4961927	3.961199e+00	2e-07	TRUE	2.17e-05	TRUE	CLMN	NM_024734 NP_079010 XM_006720256 XP_006720319 XR_245721 XR_245722 XR_429330 XR_429331 XR_429332	overlaps exon upstream	inside	128159	overlaps exon upstream	0	13	13	overlaps 3'UTR		137969	128228	0	TRUE
76	chr5	76028137	76031589	3453		45.454572	156954.64	3028899	3032351	1355	5311	0.6167118	1.3143059	0.0558682	1.5184215	0.0738564	1.1608473	0.0382704	-4.5561302	0.2082713	-4.1534337	-0.1791229	-5.101929e+00	2e-07	TRUE	2.17e-05	TRUE	F2R	NM_001992 NP_001983	overlaps exon upstream	inside	16269	overlaps exon upstream	0	2	2	overlaps 3'UTR		19727	17195	0	TRUE
77	chr9	37438107	37442552	4446		35.297808	156934.05	1759476	1763921	782	4446	0.5133116	0.9945595	0.1401453	1.0054411	0.1484880	0.8391244	0.2905530	-2.8271341	0.0156990	-2.7437116	-0.2451729	-1.775256e+00	2e-07	TRUE	2.17e-05	TRUE	ZBTB5	NM_014872 NP_055687 XM_005251634 XP_005251691	inside exon	inside	22855	inside exon	0	2	2	overlaps 5' UTR		27307	2033	0	TRUE
78	chr19	39913371	39919028	5658		27.720021	156839.88	5226048	5231705	1677	15677	0.2806804	0.5977730	0.0416361	0.6007129	0.0496481	0.4423047	0.0705657	-3.8436901	0.0070778	-3.5897884	-0.4345573	-3.082560e+00	2e-07	TRUE	2.17e-05	TRUE	PLEKHG2	NM_022835 NP_073746 XM_005259163 XM_006723329 XM_006723330 XM_006723331 XM_006723332 XM_006723333 XM_006723334 XP_005259220 XP_006723392 XP_006723393 XP_006723394 XP_006723395 XP_006723396 XP_006723397	covers exon(s)	inside	7562	covers exon(s)	0	15	15	overlaps 3'UTR		13246	8710	0	TRUE
79	chr2	182541064	182543985	2922		53.427606	156115.46	9270738	9273659	4093	15327	0.8566605	0.5746117	0.1040324	0.6935620	0.1335985	7.9171707	10.0479464	-2.4655549	0.2714374	-2.1046841	3.7843257	4.128170e+00	2e-07	TRUE	2.17e-05	TRUE	NEUROD1	NM_002500 NP_002491	overlaps exon upstream	inside	1407	overlaps exon upstream	0	2	2	overlaps 5' UTR		4559	1070	0	TRUE
80	chr14	29236160	29239591	3432		45.180971	155061.09	686508	689939	168	49483	4.5370405	10.5830610	1.2074943	6.2872295	0.8950761	0.0521083	0.0072262	-3.1316687	-0.7512606	-3.5636028	-7.6660278	-1.051622e+01	2e-07	TRUE	2.17e-05	TRUE	FOXG1	NM_005249 NP_005240	covers	covers	0	NA	NA	NA	1	NA		3205	1469	0	TRUE
81	chr17	40175669	40179151	3483		44.448792	154815.14	3827470	3830952	1426	35274	0.8921872	1.5805664	0.3212339	1.6247163	0.2973188	1.8803556	0.8942889	-2.2987454	0.0397462	-2.4103590	0.2505639	-8.216288e-01	2e-07	TRUE	2.17e-05	TRUE	NKIRAS2	NM_001001349 NM_001144927 NM_001144928 NM_001144929 NM_017595 NP_001001349 NP_001138399 NP_001138400 NP_001138401 NP_060065 XM_005257251 XP_005257308	overlaps 3'	overlaps 3'	3544	overlaps exon upstream	0	4	4	overlaps 3'UTR		5531	2315	0	TRUE
82	chr22	50276982	50282428	5447		28.318523	154250.99	3494509	3499955	1260	15935	0.4304968	0.8921264	0.1001839	0.7607083	0.0956301	0.6931632	0.2779421	-3.1545973	-0.2299049	-3.2217118	-0.3640531	-1.682464e+00	2e-07	TRUE	2.17e-05	TRUE	ZBED4	NM_014838 NP_055653 XM_005261875 XP_005261932	inside exon	inside	29485	inside exon	0	2	2	overlaps 3'UTR		36229	3515	0	TRUE
83	chr3	39565908	39571005	5098		30.229345	154109.20	2234125	2239222	893	33241	2.5075699	0.1021944	4.0145306	0.0359200	6.1440249	0.0176321	1.7037060	5.2958430	-1.5084569	5.9097957	-2.5350382	4.059288e+00	2e-07	TRUE	2.17e-05	TRUE	MOBP	NM_001278322 NM_001278323 NM_182935 NP_001265251 NP_001265252 NP_891980 NR_003090 NR_103504 NR_103505 NR_103506	NA	NA	0	NA	NA	NA	2	NA		0	0	0	TRUE
84	chr16	9847264	9858805	11542		13.328278	153834.99	1409354	1420895	358	11542	0.6056720	0.0728190	1.2258033	0.0744018	0.4909485	0.0682721	0.5568314	4.0732680	0.0310223	2.7531841	-0.0930185	2.934853e+00	2e-07	TRUE	2.17e-05	TRUE	GRIN2A	NM_000833 NM_001134407 NM_001134408 NP_000824 NP_001127879 NP_001127880 XM_005255267 XM_005255268 XP_005255324 XP_005255325	overlaps 3'	overlaps 3'	417119	overlaps two exons	0	14	14	overlaps 3'UTR		419392	417056	0	TRUE
85	chr1	202694493	202699159	4667		32.864776	153379.91	12780355	12785021	5059	11658	0.8162916	1.6445410	0.2545157	1.3903140	0.2116174	1.2327990	0.3336977	-2.6918584	-0.2422743	-2.9581548	-0.4157474	-2.301071e+00	2e-07	TRUE	2.17e-05	TRUE	KDM5B	NM_006618 NP_006609	overlaps 3'	overlaps 3'	77268	overlaps exon upstream	0	26	26	inside transcription region		77592	43512	0	TRUE
86	chr13	36047923	36051346	3424		44.735145	153173.14	948693	952116	477	13400	0.1806593	0.0901292	0.0139489	0.1931425	0.0509507	3.5285848	1.6127737	-2.6918457	1.0995999	-0.8228911	5.2909519	4.161406e+00	2e-07	TRUE	2.17e-05	TRUE	NBEA	NM_001204197 NM_015678 NP_001191126 NP_056493 XM_005266346 XM_005266347 XM_005266348 XM_005266350 XM_005266351 XM_005266352 XM_006719803 XM_006719804 XM_006719805 XM_006719806 XP_005266403 XP_005266404 XP_005266405 XP_005266407 XP_005266408 XP_005266409 XP_006719866 XP_006719867 XP_006719868 XP_006719869	overlaps 5'	overlaps 5'	0	overlaps exon downstream	0	1	9	5' UTR		151419	77735	0	TRUE
87	chr4	7760840	7765522	4683		32.695754	153114.22	992822	997504	358	5081	1.2013377	2.2675231	0.4261538	2.0608106	0.3624680	2.3186812	0.7560819	-2.4116710	-0.1379053	-2.6451918	0.0321873	-1.584503e+00	2e-07	TRUE	2.17e-05	TRUE	AFAP1-AS1	NM_032654 NR_026892	NA	NA	0	NA	NA	NA	2	NA		0	0	0	TRUE
88	chr5	150897979	150902724	4746		32.247379	153046.06	7190969	7195714	3053	92851	0.0684381	0.0049683	0.0042102	0.0139680	0.0074815	0.0918963	1.4253400	-0.2388510	1.4913109	0.5905838	4.2091922	8.164347e+00	2e-07	TRUE	2.17e-05	TRUE	FAT2	NM_001447 NP_001438 XM_006714761 XP_006714824	covers exon(s)	inside	45781	covers exon(s)	0	19	23	inside transcription region		64852	63366	0	TRUE
89	chr9	14081845	14088386	6542		23.203462	151797.05	595813	602354	262	20671	3.8065566	9.2591398	0.7170782	4.2203631	0.5856684	4.0783858	1.7141364	-3.6906757	-1.1335110	-3.9827222	-1.1828799	-2.433396e+00	2e-07	TRUE	2.17e-05	TRUE	NFIB	NM_001190737 NM_001190738 NM_001282787 NM_005596 NP_001177666 NP_001177667 NP_001269716 NP_005587 XM_005251467 XM_005251468 XM_005251469 XM_005251470 XM_005251471 XM_006716773 XM_006716774 XM_006716775 XP_005251524 XP_005251525 XP_005251526 XP_005251527 XP_005251528 XP_006716836 XP_006716837 XP_006716838	overlaps exon upstream	inside	310596	overlaps exon upstream	0	9	9	overlaps 3'UTR		317140	310322	0	TRUE
90	chr3	12190117	12195216	5100		29.433266	150109.65	751131	756230	265	22745	0.2236413	0.0529099	0.2002603	0.1018524	0.1850960	0.7304420	1.9104752	1.9202660	0.9448700	1.8066633	3.7871592	5.174249e+00	2e-07	TRUE	2.17e-05	TRUE	TIMP4	NM_003256 NP_003247	overlaps 3'	overlaps 3'	5635	overlaps exon upstream	0	5	5	overlaps 3'UTR		6283	5325	0	TRUE
91	chr5	150027500	150032402	4903		30.466492	149377.21	7060816	7065718	3017	11738	2.6939930	0.4725262	5.0164908	0.4901664	3.7034236	0.1546126	0.4447870	3.4082124	0.0528774	2.9703934	-1.6117361	-8.727970e-02	2e-07	TRUE	2.17e-05	TRUE	SYNPO	NM_001109974 NM_001166208 NM_001166209 NM_007286 NP_001103444 NP_001159680 NP_001159681 NP_009217 XM_005268369 XM_005268370 XM_005268371 XM_006714755 XP_005268426 XP_005268427 XP_005268428 XP_006714818	covers exon(s)	inside	7293	covers exon(s)	0	2	3	overlaps 5' UTR		18585	8811	0	TRUE
92	chr11	108378762	108385602	6841		21.798306	149122.21	6834982	6841822	2573	9443	0.0464461	0.0062196	0.0332747	0.0157045	0.0174311	0.1278763	0.5926856	2.4195447	1.3362961	1.4867844	4.3617942	6.574313e+00	2e-07	TRUE	2.17e-05	TRUE	EXPH5	NM_001144763 NM_001144765 NM_015065 NP_055880 XM_005271461 XM_005271462 XM_005271463 XP_005271518 XP_005271519 XP_005271520	inside exon	inside	78772	inside exon	0	6	6	overlaps 3'UTR		88216	83999	0	TRUE
93	chr17	65026576	65029502	2927		50.616448	148154.34	6115928	6118854	2281	13810	3.2014291	5.1909303	0.8545235	8.3938002	1.9694681	5.8858475	0.7148472	-2.6028011	0.6933310	-1.3981871	0.1812570	-2.860286e+00	2e-07	TRUE	2.17e-05	TRUE	CACNG4	NM_014405 NP_055220	overlaps exon upstream	inside	65596	overlaps exon upstream	0	4	4	overlaps 3'UTR		68538	66092	0	TRUE
94	chr10	72181468	72188337	6870		21.522891	147862.26	3262388	3269257	1478	17538	1.6745644	2.7064736	0.8863561	2.6133944	0.8560008	2.6140705	1.4001422	-1.6104559	-0.0504894	-1.6607302	-0.0501162	-9.508410e-01	2e-07	TRUE	2.17e-05	TRUE	EIF4EBP2	NM_004096 NP_004087	overlaps exon upstream	inside	17607	overlaps exon upstream	0	3	3	overlaps 3'UTR		24513	17345	0	TRUE
95	chr17	37759791	37763954	4164		35.408757	147442.07	3548040	3552203	1344	10677	3.5844582	9.1657010	0.7147735	2.1882874	0.4227387	1.6060052	3.5123359	-3.6806872	-2.0664430	-4.4384072	-2.5127686	-1.383814e+00	2e-07	TRUE	2.17e-05	TRUE	NEUROD2	NM_006160 NP_006151 XM_005257409 XP_005257466	overlaps 3'	overlaps 3'	221	overlaps exon upstream	0	2	2	overlaps 5' UTR		4154	1148	0	TRUE
96	chr1	201788962	201796098	7137		20.607917	147078.71	12677202	12684338	5023	12290	1.3256061	2.3222279	0.6357599	2.1021494	0.6269059	2.3367527	0.4058681	-1.8689557	-0.1436443	-1.8891888	0.0089955	-2.516427e+00	2e-07	TRUE	2.17e-05	TRUE	NAV1	NM_001167738 NM_020443 NP_001161210 NP_065176 XM_005245572 XM_006711607 XM_006711608 XM_006711609 XM_006711610 XM_006711611 XP_005245629 XP_006711670 XP_006711671 XP_006711672 XP_006711673 XP_006711674	overlaps exon upstream	inside	79999	overlaps exon upstream	0	27	27	overlaps 3'UTR		87139	79908	0	TRUE
97	chr15	56381924	56388820	6897		21.214575	146316.93	2390719	2397615	1071	16376	0.4821092	0.8788518	0.1621626	0.9260368	0.1514043	0.8062858	0.3914975	-2.4381792	0.0754496	-2.5372133	-0.1243287	-1.166617e+00	2e-07	TRUE	2.17e-05	TRUE	RFX7	NM_022841 NP_073752 XM_005254603 XM_006720646 XP_005254660 XP_006720709	overlaps 3'	overlaps 3'	146663	overlaps exon upstream	0	9	9	overlaps 3'UTR		152752	149940	0	TRUE
98	chr13	107142116	107145782	3667		39.787461	145900.62	3516285	3519951	1531	6080	2.3419605	5.1657769	0.7593086	3.1077802	0.5390126	1.2808364	0.5712600	-2.7662271	-0.7331009	-3.2605945	-2.0118991	-3.176766e+00	2e-07	TRUE	2.17e-05	TRUE	EFNB2	NM_004093 NP_004084	overlaps exon upstream	inside	41606	overlaps exon upstream	0	5	5	overlaps 3'UTR		45309	41924	0	TRUE
99	chr18	59475644	59483834	8191		17.787485	145697.29	2631068	2639258	1251	10058	0.4820671	0.6215706	0.1411135	0.9665953	0.2301680	0.8382669	2.0847442	-2.1390618	0.6369938	-1.4332312	0.4314915	1.745880e+00	2e-07	TRUE	2.17e-05	TRUE	RNF152	NM_173557 NP_775828 XM_005266650 XM_005266651 XM_005266652 XM_005266653 XM_005266654 XP_005266707 XP_005266708 XP_005266709 XP_005266710 XP_005266711	overlaps 3'	overlaps 3'	76470	overlaps exon upstream	0	2	2	overlaps 5' UTR		78000	611	0	TRUE
100	chr2	203630168	203634474	4307		33.743857	145334.79	10299745	10304051	4531	4307	1.0115365	2.2244963	0.2593501	1.5165670	0.2057389	1.2450884	0.3541402	-3.1005056	-0.5526695	-3.4345924	-0.8372305	-2.651086e+00	2e-07	TRUE	2.17e-05	TRUE	FAM117B	NM_173511 NP_775782	overlaps exon upstream	inside	130267	overlaps exon upstream	0	8	8	overlaps 3'UTR		134579	130576	0	TRUE
101	chr1	36319091	36323447	4357		33.248718	144864.66	3642389	3646745	1275	12916	0.5974876	1.2275020	0.1822676	0.8972746	0.1871874	0.8011259	0.3379586	-2.7515951	-0.4521040	-2.7131699	-0.6156244	-1.860807e+00	2e-07	TRUE	2.17e-05	TRUE	AGO4	NM_017629 NP_060099 XM_005270578 XM_005270579 XP_005270635 XP_005270636 XR_246243 XR_246244	overlaps exon upstream	inside	45263	overlaps exon upstream	0	18	18	overlaps 3'UTR		49662	45188	0	TRUE
102	chr18	31325928	31331152	5225		27.564832	144026.25	1341662	1346886	695	12705	0.4194139	0.9736093	0.0911151	0.5994178	0.0478798	0.7815666	0.0261309	-3.4175808	-0.6997811	-4.3458526	-0.3169741	-5.219516e+00	2e-07	TRUE	2.17e-05	TRUE	ASXL3	NM_030632 NP_085135 XM_005258356 XP_005258413	overlaps 3'	overlaps 3'	167387	inside exon	0	12	12	overlaps 3'UTR		168858	167963	0	TRUE
103	chr5	40826277	40832675	6399		22.486993	143894.27	1674402	1680800	667	9938	1.6082028	3.0627319	0.6715787	1.9650063	0.7969387	1.7968071	1.3005012	-2.1891907	-0.6402851	-1.9422785	-0.7693835	-1.235751e+00	2e-07	TRUE	2.17e-05	TRUE	RPL37	NM_000997 NP_000988	overlaps 3'	overlaps 3'	2712	inside exon	0	4	4	overlaps 3'UTR		3957	2681	0	TRUE
104	chr22	28192749	28197815	5067		28.354259	143671.03	1236690	1241756	418	6283	0.9106463	2.3061191	0.0900242	1.2737854	0.1093212	0.7326169	0.0380069	-4.6790101	-0.8563448	-4.3988217	-1.6543361	-5.923062e+00	2e-07	TRUE	2.17e-05	TRUE	MN1	NM_002430 NP_002421	overlaps 5'	overlaps 5'	0	overlaps exon downstream	0	1	2	overlaps 5' UTR		53221	49628	0	TRUE
105	chr11	93913953	93918763	4811		29.801612	143375.56	6229842	6234652	2263	13285	1.3847056	2.7475311	0.4662100	2.4222649	0.3404623	2.3694400	0.3611785	-2.5590840	-0.1817792	-3.0125689	-0.2135897	-2.927352e+00	2e-07	TRUE	2.17e-05	TRUE	PANX1	NM_015368 NP_056183 XM_005273863 XP_005273920	overlaps 3'	overlaps 3'	51859	overlaps exon upstream	0	5	5	overlaps 3'UTR		53043	51556	0	TRUE
106	chr5	150273961	150277752	3792		37.619594	142653.50	7097618	7101409	3030	10570	0.4956624	1.1232048	0.0551017	0.9293777	0.0698267	0.8961671	0.1432699	-4.3493793	-0.2732842	-4.0076978	-0.3257814	-2.970814e+00	2e-07	TRUE	2.17e-05	TRUE	ZNF300	NM_001172831 NM_001172832 NM_052860 NP_001166302 NP_001166303 NP_443092 XM_006714805 XM_006714806 XP_006714868 XP_006714869	covers exon(s)	inside	6793	covers exon(s)	0	5	5	overlaps 3'UTR		10591	3037	0	TRUE
107	chr5	149599133	149602279	3147		44.988904	141580.08	6987229	6990375	2995	38820	10.7627961	0.7133964	21.6658981	1.1422184	13.6668497	0.3266580	0.8105891	4.9245782	0.6790626	4.2598329	-1.1269228	1.842667e-01	2e-07	TRUE	2.17e-05	TRUE	CAMK2A	NM_015981 NM_171825 NP_057065 NP_741960	overlaps exon upstream	inside	67124	overlaps exon upstream	0	18	18	overlaps 3'UTR		70349	66915	0	TRUE
108	chr2	70902218	70904021	1804		78.300013	141253.22	3882866	3884669	1737	6089	1.3931723	3.5091016	0.1324609	2.0258250	0.0999077	1.1368736	0.2555409	-4.7274634	-0.7925922	-5.1343624	-1.6260298	-3.779476e+00	2e-07	TRUE	2.17e-05	TRUE	ADD2	NM_001185054 NM_001185055 NM_001617 NM_017482 NM_017483 NM_017484 NM_017485 NM_017486 NM_017487 NM_017488 NP_001171983 NP_001171984 NP_001608 NP_059516 NP_059522	overlaps exon upstream	inside	91354	overlaps exon upstream	0	12	12	overlaps 3'UTR		93159	91190	0	TRUE
109	chr8	143852626	143856784	4159		33.861459	140829.81	6675825	6679983	2820	8661	2.3819128	0.2904981	4.1312320	0.4634783	3.9629309	0.3139563	1.8731377	3.8299712	0.6739729	3.7699669	0.1120348	2.688856e+00	2e-07	TRUE	2.17e-05	TRUE	LYNX1	NM_023946 NM_177457 NM_177458 NM_177476 NM_177477 NP_076435 NP_803252 NP_803253 NP_803429 NP_803430	overlaps exon upstream	inside	2856	overlaps exon upstream	0	4	4	overlaps 3'UTR		7025	790	0	TRUE
110	chr11	75313473	75317054	3582		39.260443	140630.91	5356620	5360201	1876	9440	1.8650984	3.5876430	0.5977062	3.5596761	0.5589234	3.3382280	0.5013981	-2.5855279	-0.0112904	-2.6823139	-0.1039538	-2.839008e+00	2e-07	TRUE	2.17e-05	TRUE	MAP6	NM_033063 NM_207577 NP_149052 NP_997460 XM_006718556 XP_006718619	overlaps 3'	overlaps 3'	62425	overlaps exon upstream	0	3	3	overlaps 3'UTR		65574	62565	0	TRUE
111	chr11	66432481	66436768	4288		32.771887	140525.85	4427030	4431317	1527	6682	0.6107349	1.1714010	0.2098640	0.9024456	0.2319835	1.0090328	0.5765567	-2.4807086	-0.3763232	-2.3361411	-0.2152619	-1.022701e+00	2e-07	TRUE	2.17e-05	TRUE	RBM4B	NM_001286135 NM_031492 NP_001273064 NP_113680 XR_247213 XR_247214	covers exon(s)	inside	8507	covers exon(s)	0	4	4	overlaps 3'UTR		12805	8455	0	TRUE
112	chr8	134039948	134047560	7613		18.455733	140503.49	6158363	6165975	2594	23216	0.1526805	0.4277091	0.0115765	0.1020729	0.0152691	0.1812537	0.0040649	-5.2073620	-2.0670305	-4.8079400	-1.2386197	-6.717261e+00	2e-07	TRUE	2.17e-05	TRUE	TG	NM_003235 NP_003226 XM_005251038 XM_005251040 XM_005251042 XM_005251043 XM_006716622 XM_006716623 XP_005251095 XP_005251097 XP_005251099 XP_005251100 XP_006716685 XP_006716686	covers exon(s)	inside	63096	covers exon(s)	0	12	19	inside transcription region		170291	169869	0	TRUE
113	chr5	171760566	171766920	6355		22.009737	139871.88	8058473	8064827	3433	9393	0.4419167	0.6998018	0.1547095	1.0294276	0.1944287	0.8318312	0.4246371	-2.1773847	0.5568241	-1.8477050	0.2493444	-7.207158e-01	2e-07	TRUE	2.17e-05	TRUE	SH3PXD2B	NM_001017995 NP_001017995 XM_005265888 XP_005265945	inside exon	inside	114607	inside exon	0	13	13	overlaps 3'UTR		121024	115983	0	TRUE
114	chr1	163044107	163047510	3404		40.791576	138854.52	10799596	10802999	4192	9049	4.5802650	0.0728542	10.6205308	0.1826305	2.4434390	0.2066006	0.1278654	7.1876276	1.3258431	5.0677568	1.5037603	8.115415e-01	2e-07	TRUE	2.17e-05	TRUE	RGS4	NM_001102445 NM_001113380 NM_001113381 NM_005613 NP_001095915 NP_001106851 NP_001106852 NP_005604	overlaps 3'	overlaps 3'	2412	overlaps exon upstream	0	5	5	overlaps 3'UTR		4897	2155	0	TRUE
115	chr6	165740790	165746642	5853		23.594463	138098.39	8579373	8585225	3528	12878	0.5683154	0.6350608	0.1044741	1.5490373	1.1380610	0.4888575	0.2596716	-2.6037498	1.2864052	0.8416112	-0.3774809	-1.290206e+00	2e-07	TRUE	2.17e-05	TRUE	PDE10A	NM_001130690 NM_006661 NP_001124162 NR_045597 XM_006715321 XP_006715384	overlaps exon upstream	inside	328946	overlaps exon upstream	0	22	22	overlaps 3'UTR		334812	328987	0	TRUE
116	chr2	223064633	223066435	1803		76.253744	137485.50	11441348	11443150	5014	6919	0.0226373	0.0010593	0.0008137	0.0036651	0.0038170	1.0543966	0.1378752	-0.3805060	1.7907424	1.8493118	9.9590787	7.024096e+00	2e-07	TRUE	2.17e-05	TRUE	PAX3	NM_000438 NM_001127366 NM_013942 NM_181457 NM_181458 NM_181459 NM_181460 NM_181461 NP_000429 NP_001120838 NP_039230 NP_852122 NP_852123 NP_852124 NP_852125 NP_852126 XM_006712559 XP_006712622	overlaps 3'	overlaps 3'	97280	inside exon	0	8	8	3'UTR		97283	96691	0	TRUE
117	chr8	61099311	61102552	3242		42.289972	137104.09	3230826	3234067	1196	29938	0.2789903	0.0680150	0.1391277	0.0936107	0.1807637	4.6981308	2.3579254	1.0324860	0.4608213	1.4101810	6.1100909	5.115522e+00	2e-07	TRUE	2.17e-05	TRUE	CA8	NM_004056 NP_004047	overlaps 3'	overlaps 3'	91402	overlaps exon upstream	0	9	9	3'UTR		92531	72362	0	TRUE
118	chr7	138516179	138522905	6727		20.377083	137076.64	7373238	7379964	3189	8848	0.6349305	1.2102305	0.2751802	1.0571102	0.1920194	0.8519336	0.0567228	-2.1368332	-0.1951560	-2.6559576	-0.5064690	-4.415209e+00	2e-07	TRUE	2.17e-05	TRUE	KIAA1549	NM_001164665 NM_020910 NP_001158137 NP_065961 XM_006716071 XM_006716072 XP_006716134 XP_006716135	inside exon	inside	143159	inside exon	0	20	20	overlaps 3'UTR		149937	143364	0	TRUE
119	chr1	167757053	167760026	2974		46.088172	137066.22	11054473	11057446	4288	3874	1.9913054	3.6783526	0.7665415	3.2979820	0.8505544	3.2188846	1.0108203	-2.2626241	-0.1574763	-2.1125844	-0.1924989	-1.863533e+00	2e-07	TRUE	2.17e-05	TRUE	MPZL1	NM_001146191 NM_003953 NM_024569 NP_001139663 NP_003944 NP_078845 XM_006711614 XP_006711677	overlaps exon upstream	inside	22758	overlaps exon upstream	0	5	5	overlaps 3'UTR		26861	15532	0	TRUE
120	chr5	82875796	82880329	4534		30.120127	136564.66	3457046	3461579	1568	14978	1.2146064	2.2588740	0.2259197	3.2037265	0.3195854	2.1847612	0.3659048	-3.3217215	0.5041472	-2.8213306	-0.0481282	-2.626063e+00	2e-07	TRUE	2.17e-05	TRUE	VCAN	NM_001126336 NM_001164097 NM_001164098 NM_004385 NP_001119808 NP_001157569 NP_001157570 NP_004376	overlaps 3'	overlaps 3'	44363	covers exon(s)	0	8	8	overlaps 3'UTR		46689	43422	0	TRUE
121	chr7	155293823	155295804	1982		68.722535	136208.06	8472163	8474144	3579	46591	0.0361515	0.0030443	0.0023897	0.0048421	0.0041267	0.6453690	0.5550591	-0.3492781	0.6695473	0.4388905	7.7278925	7.510409e+00	2e-07	TRUE	2.17e-05	TRUE	CNPY1	NM_001103176 NP_001096646	overlaps 3'	overlaps 3'	30735	overlaps exon upstream	0	4	4	overlaps 3'UTR		32586	5969	0	TRUE
122	chr19	2287174	2292159	4986		27.203545	135636.88	463398	468383	125	17650	0.2435321	0.0403359	0.1903056	0.1284992	0.6019649	0.6694588	1.2388105	2.2381817	1.6716233	3.8995433	4.0528591	4.940747e+00	2e-07	TRUE	2.17e-05	TRUE	LINGO3	NM_001101391 NP_001094861	overlaps 3'	overlaps 3'	15997	overlaps exon upstream	0	2	2	overlaps 5' UTR		18382	1778	0	TRUE
123	chr22	51159326	51169232	9907		13.446561	133215.08	3748852	3758758	1298	31121	0.3825210	0.2095235	0.3879302	0.2362564	0.4045958	0.2079949	1.9228570	0.8886850	0.1732417	0.9493694	-0.0105637	3.198068e+00	2e-07	TRUE	2.17e-05	TRUE	SHANK3	NM_001080420 NM_033517 NP_277052	overlaps 3'	overlaps 3'	23334	inside exon	0	10	10	overlaps 3'UTR		24873	23656	0	TRUE
124	chr17	72739425	72743477	4053		32.752857	132747.33	6622026	6626078	2489	47429	0.2041288	0.0136421	0.2083467	0.0241208	0.2253906	0.0426072	1.9612594	3.9328482	0.8222137	4.0462888	1.6430322	7.167570e+00	2e-07	TRUE	2.17e-05	TRUE	RAB37	NM_001006637 NM_001006638 NM_001163989 NM_001163990 NM_175738 NP_001006639 NP_001157461 NP_001157462 NP_783865 XM_005257288 XM_005257289 XP_005257345 XP_005257346	overlaps 3'	overlaps 3'	6069	covers exon(s)	0	8	8	overlaps 3'UTR		10118	8138	0	TRUE
125	chr17	35299763	35301912	2150		61.578340	132393.43	3231610	3233759	1204	37636	0.0720302	0.0155191	0.0014136	0.0355440	0.0039315	2.0209508	0.7738793	-3.4566302	1.1955630	-1.9808765	7.0248472	5.639993e+00	2e-07	TRUE	2.17e-05	TRUE	LHX1	NM_005568 NP_005559	overlaps exon upstream	inside	4991	overlaps exon upstream	0	5	5	overlaps 3'UTR		7143	4933	0	TRUE
126	chr14	24883769	24888484	4716		27.869302	131431.63	568971	573686	141	34874	0.4026381	0.7049529	0.0831130	0.7290887	0.0999342	1.4055913	0.9608383	-3.0843812	0.0485676	-2.8184764	0.9955785	4.467668e-01	2e-07	TRUE	2.17e-05	TRUE	NYNRIN	NM_025081 NP_079357	overlaps exon upstream	inside	15777	overlaps exon upstream	0	9	9	overlaps 3'UTR		20502	18199	0	TRUE
127	chr1	57460452	57463804	3353		39.150940	131273.10	5492931	5496283	2056	3353	1.7465006	4.4365132	0.3242253	1.1528904	0.2574912	3.4870666	0.8747858	-3.7743576	-1.9441709	-4.1068310	-0.3474123	-2.342425e+00	2e-07	TRUE	2.17e-05	TRUE	DAB1	NM_021080 NP_066566	overlaps 3'	overlaps 3'	1548642	overlaps exon upstream	0	21	21	3'UTR		1548867	280334	0	TRUE
128	chr3	196555184	196559308	4125		31.774179	131068.49	10308424	10312548	4326	5246	1.2863247	2.3166754	0.4940495	2.3519306	0.5760189	1.6865711	0.6024254	-2.2293284	0.0217895	-2.0078678	-0.4579628	-1.943201e+00	2e-07	TRUE	2.17e-05	TRUE	PAK2	NM_002577 NP_002568	overlaps exon upstream	inside	88456	overlaps exon upstream	0	15	15	overlaps 3'UTR		92790	45758	0	TRUE
129	chr14	77245287	77249357	4071		32.151524	130888.86	3472670	3476740	1410	13057	2.0461720	3.7409050	0.8591077	3.3206320	0.9594922	2.1825855	0.9411182	-2.1224765	-0.1719295	-1.9630443	-0.7773492	-1.990939e+00	2e-07	TRUE	2.17e-05	TRUE	VASH1	NM_014909 NP_055724 XM_006720080 XP_006720143	overlaps exon upstream	inside	17052	overlaps exon upstream	0	7	7	overlaps 3'UTR		21128	16196	0	TRUE
130	chr2	202898632	202903133	4502		28.979942	130467.70	10234102	10238603	4497	10932	0.3156745	0.3006081	0.0500310	0.7458228	0.1872917	2.1453678	1.6021168	-2.5869893	1.3109492	-0.6825968	2.8352694	2.414024e+00	2e-07	TRUE	2.17e-05	TRUE	FZD7	NM_003507 NP_003498	overlaps 5'	overlaps 5'	0	inside exon	0	1	1	overlaps 3'UTR		3850	1724	0	TRUE
131	chr12	49388926	49392478	3553		36.658629	130248.11	2716443	2719995	1084	4165	4.0789240	0.7603293	7.4418178	0.8945078	6.0707941	0.0499642	0.0407121	3.2909588	0.2344697	2.9971890	-3.9276572	-4.223096e+00	2e-07	TRUE	2.17e-05	TRUE	DDN	NM_015086 NP_055901	overlaps 3'	overlaps 3'	610	overlaps exon upstream	0	2	2	overlaps 3'UTR		4155	2547	0	TRUE
132	chr11	8017649	8023345	5697		22.784849	129805.29	763855	769551	229	9715	0.4991859	0.9393686	0.1889254	0.7970992	0.1883679	0.8533875	0.2911890	-2.3138751	-0.2369322	-2.3181379	-0.1384904	-1.689736e+00	2e-07	TRUE	2.17e-05	TRUE	EIF3F	NM_003754 NP_003745	overlaps 3'	overlaps 3'	9204	inside exon	0	7	7	3'UTR		9274	3926	0	TRUE
133	chr2	107418763	107423408	4646		27.885523	129556.14	5914920	5919565	2526	10881	0.9165700	1.7530326	0.3304290	1.6181962	0.2361494	2.4747580	0.1392370	-2.4074406	-0.1154662	-2.8920808	0.4974347	-3.654238e+00	2e-07	TRUE	2.17e-05	TRUE	ST6GAL2	NM_001142351 NM_001142352 NM_032528 NP_001135823 NP_001135824 NP_115917 XM_006712801 XM_006712802 XP_006712864 XP_006712865	overlaps exon upstream	inside	80155	overlaps exon upstream	0	6	6	overlaps 3'UTR		85507	37299	0	TRUE
134	chrX	105199497	105202581	3085		41.954363	129429.21	3876842	3879926	1536	5558	0.0758465	0.0077696	0.0014143	0.0071772	0.0043020	0.6719426	1.4355291	-2.4577023	-0.1144119	-0.8528268	6.4343545	7.529527e+00	2e-07	TRUE	2.17e-05	TRUE	NRK	NM_198465 NP_940867 XM_006724631 XM_006724632 XM_006724633 XM_006724634 XP_006724694 XP_006724695 XP_006724696 XP_006724697	inside exon	inside	7067	inside exon	0	4	4	overlaps 3'UTR		10172	6960	0	TRUE
135	chr6	99282991	99289935	6945		18.604703	129209.66	5424267	5431211	2044	9947	0.7785426	1.7882137	0.2502903	0.8321802	0.1937023	0.4565560	0.1328543	-2.8368449	-1.1035513	-3.2066063	-1.9696554	-3.750602e+00	2e-07	TRUE	2.17e-05	TRUE	POU3F2	NM_005604 NP_005595	overlaps 3'	overlaps 3'	411	inside exon	0	1	1	overlaps 3'UTR		4086	1331	0	TRUE
136	chr4	90161042	90171384	10343		12.489368	129177.53	4291666	4302008	1826	13805	0.2875741	0.5516936	0.0702521	0.3350921	0.1200391	0.4300413	0.7334142	-2.9732538	-0.7193094	-2.2003634	-0.3593920	4.107609e-01	2e-07	TRUE	2.17e-05	TRUE	GPRIN3	NM_198281 NP_938022 XM_005262936 XM_005262937 XP_005262993 XP_005262994	overlaps 3'	overlaps 3'	57777	inside exon	0	2	2	overlaps 5' UTR		63732	2330	0	TRUE
137	chr18	22804307	22807664	3358		38.461754	129154.57	1082868	1086225	572	3358	0.5266830	0.2013549	0.2282287	1.6356900	0.2581575	2.3379801	3.1301798	0.1807393	3.0220866	0.3585106	3.5374499	3.958433e+00	2e-07	TRUE	2.17e-05	TRUE	ZNF521	NM_015461 NP_056276 XM_005258241 XM_006722436 XM_006722437 XP_005258298 XP_006722499 XP_006722500	NA	NA	0	NA	NA	NA	9	NA		0	0	0	TRUE
138	chr22	28373819	28377226	3408		37.850869	128995.76	1255284	1258691	421	9937	0.8133408	1.9974059	0.1070312	1.1693932	0.1202385	0.6656933	0.0875001	-4.2220244	-0.7723674	-4.0541572	-1.5851979	-4.512698e+00	2e-07	TRUE	2.17e-05	TRUE	TTC28-AS1	NR_026962 NR_026963	NA	NA	0	NA	NA	NA	5	NA		0	0	0	TRUE
139	chr15	99500290	99507496	7207		17.864012	128745.93	5455313	5462519	2451	7470	0.7522004	1.3986463	0.3405844	1.0304218	0.3004879	1.2822932	0.4111624	-2.0379470	-0.4407962	-2.2186526	-0.1253050	-1.766251e+00	2e-07	TRUE	2.17e-05	TRUE	IGF1R	NM_000875 NM_152452 NP_000866 XM_005254896 XM_005254897 XM_006720486 XM_006720487 XP_005254953 XP_005254954 XP_006720549 XP_006720550	inside exon	inside	307529	inside exon	0	21	21	overlaps 3'UTR		314998	307860	0	TRUE
140	chr4	2268281	2273141	4861		26.478887	128713.87	473405	478265	123	7884	0.1215669	0.0324286	0.1532460	0.0302828	0.1272126	0.0441347	0.7016619	2.2405092	-0.0987673	1.9719017	0.4446440	4.435436e+00	2e-07	TRUE	2.17e-05	TRUE	ZFYVE28	NM_001172656 NM_001172657 NM_001172658 NM_001172659 NM_001172660 NM_020972 NP_001166127 NP_001166128 NP_001166129 NP_001166130 NP_001166131 NP_066023 XM_006713900 XM_006713901 XM_006713902 XM_006713903 XM_006713904 XP_006713963 XP_006713964 XP_006713965 XP_006713966 XP_006713967	overlaps 3'	overlaps 3'	147229	overlaps two exons	0	12	12	overlaps 3'UTR		149046	147598	0	TRUE
141	chr4	126411052	126414022	2971		43.233945	128448.05	5669443	5672413	2460	11938	0.8545265	2.2335597	0.0721254	1.0117895	0.0992645	0.8641232	0.0458885	-4.9526940	-1.1424357	-4.4919239	-1.3700359	-5.605068e+00	2e-07	TRUE	2.17e-05	TRUE	FAT4	NM_024582 NP_078858 XM_005263210 XM_006714304 XP_005263267 XP_006714367	overlaps 3'	overlaps 3'	41436	overlaps exon upstream	0	9	9	overlaps 3'UTR		43327	43185	0	TRUE
142	chr2	60684326	60689564	5239		24.480871	128255.28	3187804	3193042	1434	10609	1.3471767	3.1393138	0.4087269	1.5366962	0.2332467	1.2836648	0.0414023	-2.9412401	-1.0306173	-3.7505204	-1.2901807	-6.244594e+00	2e-07	TRUE	2.17e-05	TRUE	BCL11A	NM_018014 NM_022893 NM_138553 NM_138559 NP_060484 NP_075044 NP_612569	overlaps 3'	overlaps 3'	91069	overlaps exon upstream	0	3	3	overlaps 3'UTR		96304	92866	0	TRUE
143	chr11	6642549	6645624	3076		41.279351	126975.28	685045	688120	193	41941	1.2217595	2.4361656	0.3112249	2.3580859	0.3905895	2.0837061	0.3439718	-2.9685830	-0.0469959	-2.6408869	-0.2254604	-2.824250e+00	2e-07	TRUE	2.17e-05	TRUE	DCHS1	NM_003737 NM_024542 NP_003728 XM_005253207 XP_005253264	overlaps 3'	overlaps 3'	31450	overlaps exon upstream	0	21	21	overlaps 3'UTR		34516	19834	0	TRUE
144	chr18	8826494	8832778	6285		20.086629	126244.46	484284	490568	217	54948	0.1520057	0.0737519	0.1116436	0.0825658	0.0535250	0.0943748	1.5736165	0.5981473	0.1628640	-0.4624691	0.3557210	4.415259e+00	2e-07	TRUE	2.17e-05	TRUE	MTCL1	NM_015210 NP_056025 XM_005258098 XM_005258099 XM_006722318 XM_006722319 XM_006722320 XP_005258155 XP_005258156 XP_006722381 XP_006722382 XP_006722383	overlaps 3'	overlaps 3'	36822	overlaps exon upstream	0	10	10	overlaps 3'UTR		43103	35608	0	TRUE
145	chr20	34238279	34243269	4991		25.158634	125566.74	2133673	2138663	840	6387	1.1018834	2.0042597	0.4391746	1.8338975	0.3890838	1.8706283	0.8423227	-2.1902029	-0.1281565	-2.3649166	-0.0995466	-1.250625e+00	2e-07	TRUE	2.17e-05	TRUE	CPNE1	NM_001198863 NM_003915 NM_152925 NM_152926 NM_152927 NM_152928 NM_152930 NM_152931 NP_001185792 NP_003906 NP_690902 NP_690903 NP_690904 NP_690905 NR_037188	NA	NA	0	NA	NA	NA	9	NA		0	0	0	TRUE
146	chr16	49322448	49324383	1936		64.690835	125241.46	3497709	3499644	1159	80903	0.0729966	0.0107140	0.0054123	0.0089153	0.0064674	0.8354442	1.2462033	-0.9851692	-0.2651401	-0.7282299	6.2849780	6.861902e+00	2e-07	TRUE	2.17e-05	TRUE	CBLN1	NM_004352 NP_004343	upstream	upstream	6706	NA	NA	NA	3	NA		3913	2061	0	TRUE
147	chr13	74260621	74269811	9191		13.615411	125139.25	2452182	2461372	1112	9621	0.3866377	0.5214724	0.2030011	0.9339261	0.1563035	1.0759592	0.2478870	-1.3611032	0.8407176	-1.7382405	1.0449607	-1.072909e+00	2e-07	TRUE	2.17e-05	TRUE	KLF12	NM_007249 NM_016285 NP_009180 XM_005266251 XM_005266252 XM_006719762 XP_005266308 XP_005266309 XP_006719825	overlaps exon upstream	inside	438583	overlaps exon upstream	0	8	8	overlaps 3'UTR		448245	299532	0	TRUE
148	chr11	122940542	122944485	3944		31.685749	124968.60	7966137	7970080	3002	26962	0.8110925	1.9410843	0.1359067	0.9187265	0.1975641	0.6300091	0.5599580	-3.8361742	-1.0791554	-3.2964698	-1.6234183	-1.793472e+00	2e-07	TRUE	2.17e-05	TRUE	CLMP	NM_024769 NP_079045	overlaps 3'	overlaps 3'	121522	overlaps exon upstream	0	7	7	overlaps 3'UTR		122974	121466	0	TRUE
149	chr15	63882855	63886819	3965		31.389900	124460.95	2816764	2820728	1297	27647	0.4542593	0.9023929	0.0834974	0.6897907	0.1178803	0.9213875	0.9368857	-3.4339527	-0.3875970	-2.9364333	0.0300523	5.411740e-02	2e-07	TRUE	2.17e-05	TRUE	USP3	NM_001256702 NM_006537 NP_001243631 NP_006528 NR_046341 NR_046342 XM_005254816 XM_006720789 XM_006720790 XM_006720791 XM_006720792 XP_005254873 XP_006720852 XP_006720853 XP_006720854 XP_006720855	overlaps exon upstream	inside	53631	overlaps exon upstream	0	14	14	overlaps 3'UTR		57615	32663	0	TRUE
150	chr13	27329152	27334687	5536		22.246312	123155.58	486185	491720	258	17213	1.0101859	2.2907228	0.2812681	0.9655013	0.4218979	0.7888264	0.4768005	-3.0257850	-1.2464528	-2.4408369	-1.5380232	-2.264345e+00	2e-07	TRUE	2.17e-05	TRUE	GPR12	NM_005288 NP_005279 XM_005266360 XP_005266417	overlaps 3'	overlaps 3'	235	overlaps exon upstream	0	2	2	overlaps 5' UTR		2213	527	0	TRUE
151	chr1	156638553	156643005	4453		27.592612	122869.90	10281532	10285984	4033	8633	1.5754547	2.3061910	0.4340743	4.5099257	0.5738780	5.8152347	1.3235333	-2.4094980	0.9675917	-2.0066959	1.3343254	-8.011175e-01	2e-07	TRUE	2.17e-05	TRUE	NES	NM_006617 NP_006608	overlaps 3'	overlaps 3'	4184	overlaps exon upstream	0	4	4	overlaps 3'UTR		8633	7942	0	TRUE
152	chr1	101004401	101008368	3968		30.903009	122623.14	7590516	7594483	3079	7259	0.3361346	0.0706036	0.1489575	0.5484161	1.4924926	0.0875346	0.0088630	1.0770882	2.9574581	4.4018392	0.3101120	-2.993866e+00	2e-07	TRUE	2.17e-05	TRUE	GPR88	NM_022049 NP_071332	overlaps 3'	overlaps 3'	673	overlaps exon upstream	0	2	2	overlaps 3'UTR		3855	1154	0	TRUE
153	chr20	45072322	45077088	4767		25.717261	122594.19	3081219	3085985	1211	15581	0.0393348	0.0066853	0.0230796	0.0077070	0.0361581	0.0126099	0.5188939	1.7875467	0.2051668	2.4352448	0.9154853	6.278295e+00	2e-07	TRUE	2.17e-05	TRUE	ZNF663P	NM_173643 NR_045983	downstream	downstream	9194	NA	NA	NA	1	NA		1150	212	0	TRUE
154	chr1	158064434	158069989	5556		21.738585	120779.58	10381888	10387443	4067	17735	0.2520160	0.4431429	0.0745732	0.5693805	0.1042630	0.5044194	0.1039245	-2.5710428	0.3616210	-2.0875445	0.1868518	-2.092236e+00	2e-07	TRUE	2.17e-05	TRUE	KIRREL	NM_001286349 NM_018240 NP_001273278 NP_060710 XM_005245305 XM_005245306 XM_006711430 XP_005245362 XP_005245363 XP_006711493	overlaps 3'	overlaps 3'	8048	inside exon	0	11	11	overlaps 3'UTR		9458	8428	0	TRUE
155	chr22	28144264	28147088	2825		42.739467	120738.99	1226708	1229532	416	2825	2.7746885	6.5204352	0.4958885	3.9162486	0.7888418	2.4721643	0.1648293	-3.7168806	-0.7354959	-3.0471604	-1.3991936	-5.305923e+00	2e-07	TRUE	2.17e-05	TRUE	MN1	NM_002430 NP_002421	overlaps 3'	overlaps 3'	50398	overlaps exon upstream	0	2	2	overlaps 3'UTR		53221	49628	0	TRUE
156	chr1	210414902	210420185	5284		22.848517	120731.56	13516995	13522278	5278	15359	0.2452610	0.1005588	0.1624740	1.2319361	0.1089002	0.2663042	0.0589419	0.6921702	3.6148167	0.1149676	1.4050364	-7.706731e-01	2e-07	TRUE	2.17e-05	TRUE	SERTAD4	NM_019605 NP_062551 XM_005273193 XM_006711454 XP_005273250 XP_006711517	overlaps 3'	overlaps 3'	3772	overlaps exon upstream	0	3	3	overlaps 3'UTR		5310	4376	0	TRUE
157	chr3	44484849	44490231	5383		22.427623	120727.89	2571531	2576913	1034	23530	0.5340982	1.0072502	0.1975224	0.8808709	0.1596379	0.7507770	0.4520264	-2.3503337	-0.1934196	-2.6575473	-0.4239656	-1.155943e+00	2e-07	TRUE	2.17e-05	TRUE	ZNF445	NM_181489 NP_852466 XM_005265102 XM_005265103 XM_006713126 XP_005265159 XP_005265160 XP_006713189	inside exon	inside	70995	inside exon	0	7	7	overlaps 3'UTR		79964	8974	0	TRUE
158	chr2	37869093	37873969	4877		24.692228	120424.00	2036515	2041391	959	4877	0.5774267	1.0337185	0.2721433	1.0650020	0.1681631	0.8674487	0.0686655	-1.9254048	0.0430127	-2.6199107	-0.2529931	-3.912115e+00	2e-07	TRUE	2.17e-05	TRUE	CDC42EP3	NM_001270436 NM_001270437 NM_001270438 NM_006449 NP_001257365 NP_001257366 NP_001257367 NP_006440	overlaps exon upstream	inside	25709	overlaps exon upstream	0	2	2	overlaps 5' UTR		30653	764	0	TRUE
159	chr18	42643516	42648466	4951		24.279630	120208.45	1801271	1806221	861	5426	0.6297790	1.2668746	0.2226884	1.0379042	0.1178875	0.6254936	0.3604320	-2.5081752	-0.2876004	-3.4257909	-1.0182068	-1.813475e+00	2e-07	TRUE	2.17e-05	TRUE	SETBP1	NM_001130110 NM_015559 NP_001123582 NP_056374 XM_005258243 XM_005258244 XM_006722438 XP_005258300 XP_005258301 XP_006722501	inside exon	inside	382653	inside exon	0	6	6	overlaps 3'UTR		387612	362351	0	TRUE
160	chr19	2511215	2515150	3936		30.507364	120076.98	503699	507634	138	13418	2.2960793	0.8247314	2.4549604	1.2603949	6.5614792	0.7133359	1.4590779	1.5737035	0.6118796	2.9920249	-0.2093428	8.230606e-01	2e-07	TRUE	2.17e-05	TRUE	GNG7	NM_052847 NP_443079	overlaps 3'	overlaps 3'	187596	overlaps exon upstream	0	5	5	overlaps 3'UTR		191528	5666	0	TRUE
161	chr4	57193805	57196509	2705		44.342738	119947.11	2932670	2935374	1156	28832	1.3206886	2.7945545	0.2811910	2.5422412	0.3732791	1.3092237	0.2009078	-3.3129962	-0.1365174	-2.9042918	-1.0939067	-3.798013e+00	2e-07	TRUE	2.17e-05	TRUE	KIAA1211	NM_020722 NP_065773 XM_005265752 XM_005265754 XM_005265755 XM_005265756 XM_006714044 XM_006714045 XP_005265809 XP_005265811 XP_005265812 XP_005265813 XP_006714107 XP_006714108	overlaps exon upstream	inside	55318	overlaps exon upstream	0	10	10	overlaps 3'UTR		58403	29531	0	TRUE
162	chr13	77455814	77461588	5775		20.743445	119793.39	2549944	2555718	1156	10913	1.9739331	4.6626001	0.4423655	1.2488839	0.5677631	4.6083263	1.8851450	-3.3978239	-1.9004953	-3.0377736	-0.0168918	-1.306459e+00	2e-07	TRUE	2.17e-05	TRUE	KCTD12	NM_138444 NP_612453	overlaps 5'	overlaps 5'	0	inside exon	0	1	1	overlaps 5' UTR		6236	977	0	TRUE
163	chr1	206634377	206637781	3405		35.177604	119779.74	13287110	13290514	5199	27470	1.7939923	3.1735192	0.5558228	2.4056271	0.5329436	2.9893669	5.2132431	-2.5133865	-0.3996706	-2.5740288	-0.0862436	7.160976e-01	2e-07	TRUE	2.17e-05	TRUE	SRGAP2	NM_001042758 NM_001170637 NM_015326 NP_001164108 NP_056141 XM_005277510 XM_005277511 XM_005277512 XM_005277513 XM_005277514 XM_005277515 XM_006711246 XM_006711247 XP_005277567 XP_005277568 XP_005277569 XP_005277570 XP_005277571 XP_005277572 XP_006711309 XP_006711310	overlaps exon upstream	inside	118177	overlaps exon upstream	0	20	20	overlaps 3'UTR		121583	118564	0	TRUE
164	chr4	7032050	7034769	2720		43.870899	119328.84	955599	958318	336	2720	3.1664915	5.8063898	1.4492884	4.5813005	1.5525210	3.8938020	1.2066464	-2.0022967	-0.3418842	-1.9030286	-0.5764619	-2.266639e+00	2e-07	TRUE	2.17e-05	TRUE	TBC1D14	NM_001113361 NM_001113363 NM_001286805 NM_020773 NP_001106832 NP_001106834 NP_001273734 NP_065824 XM_005247986 XM_006713895 XM_006713896 XP_005248043 XP_006713958 XP_006713959 XR_241653	overlaps exon upstream	inside	29255	overlaps exon upstream	0	7	7	overlaps 3'UTR		32050	19730	0	TRUE
165	chr5	180272372	180278493	6122		19.454513	119100.53	8940075	8946196	3755	10008	0.3501771	0.6498541	0.1392228	0.5478035	0.1414340	0.5194652	0.2339162	-2.2227201	-0.2464574	-2.1999868	-0.3230889	-1.474124e+00	2e-07	TRUE	2.17e-05	TRUE	ZFP62	NM_001172638 NM_152283 NP_001166109 NP_689496 XM_005265963 XM_005265964 XM_006714905 XM_006714906 XM_006714907 XM_006714908 XM_006714909 XM_006714910 XP_005266020 XP_005266021 XP_006714968 XP_006714969 XP_006714970 XP_006714971 XP_006714972 XP_006714973	overlaps 3'	overlaps 3'	9793	inside exon	0	2	2	overlaps 3'UTR		13675	12427	0	TRUE
166	chr22	20759666	20762755	3090		38.390894	118627.86	498482	501571	152	9986	0.6791829	1.3430742	0.2356180	1.1137124	0.2049499	0.9153597	0.2933307	-2.5110176	-0.2701623	-2.7121955	-0.5531283	-2.194939e+00	2e-07	TRUE	2.17e-05	TRUE	ZNF74	NM_001256523 NM_001256524 NM_001256525 NM_003426 NP_001243452 NP_001243453 NP_001243454 NP_003417 NR_046282	overlaps 3'	overlaps 3'	11261	overlaps exon upstream	0	6	6	overlaps 3'UTR		14348	6243	0	TRUE
167	chr17	9143405	9147310	3906		30.325221	118450.31	1247079	1250984	429	5852	0.2816250	0.2051697	0.1317292	1.1418637	0.2080255	0.7249221	0.1963760	-0.6392429	2.4765007	0.0199424	1.8210082	-6.319900e-02	2e-07	TRUE	2.17e-05	TRUE	NTN1	NM_004822 NP_004813 XM_006721595 XP_006721658	inside exon	inside	218546	inside exon	0	7	7	3'UTR		222458	217594	0	TRUE
168	chr7	70254730	70258414	3685		32.130038	118399.19	3576808	3580492	1498	8551	2.5195455	5.9075192	0.4012034	3.5334798	0.6692024	3.3519147	0.5262462	-3.8801468	-0.7414627	-3.1420378	-0.8175670	-3.488743e+00	2e-07	TRUE	2.17e-05	TRUE	AUTS2	NM_001127231 NM_001127232 NM_015570 NP_001120703 NP_001120704 NP_056385 XM_005250257 XM_006715920 XP_005250314 XP_006715983	overlaps 3'	overlaps 3'	23482	overlaps exon upstream	0	11	11	overlaps 3'UTR		26637	24685	0	TRUE
169	chr1	164815819	164821064	5246		22.566664	118384.72	10858372	10863617	4215	5246	3.3779736	7.0738267	1.3256887	4.3478661	1.0752747	1.8443388	0.8380125	-2.4157489	-0.7021834	-2.7177856	-1.9393872	-3.077447e+00	2e-07	TRUE	2.17e-05	TRUE	PBX1	NM_001204961 NM_001204963 NM_002585 NP_001191890 NP_001191892 NP_002576 XM_005245228 XM_005245229 XM_005245230 XM_006711347 XP_005245285 XP_005245286 XP_005245287 XP_006711410	inside intron	inside	257053	inside intron	-24956	7	8	inside transcription region		295534	92003	0	TRUE
170	chr2	100162311	100168063	5753		20.573669	118360.32	5482568	5488320	2357	10210	1.2354689	2.8824807	0.4163532	0.7830159	0.3407949	0.9746276	0.8331204	-2.7914311	-1.8801974	-3.0803354	-1.5643879	-1.790714e+00	2e-07	TRUE	2.17e-05	TRUE	AFF3	NM_001025108 NM_002285 NP_001020279 NP_002276 XM_005263942 XM_005263943 XM_005263945 XM_006712523 XP_005263999 XP_005264000 XP_005264002 XP_006712586	overlaps 3'	overlaps 3'	590974	overlaps exon upstream	0	24	24	overlaps 3'UTR		595321	552980	0	TRUE
171	chr4	77955650	77960225	4576		25.826790	118183.39	3634253	3638828	1477	30014	1.9577451	3.4028257	0.9141345	3.3999247	0.8026688	3.0118822	0.8246240	-1.8962550	-0.0012305	-2.0838564	-0.1760679	-2.044925e+00	2e-07	TRUE	2.17e-05	TRUE	SEPT11	NM_018243 NP_060713 XM_005263120 XM_005263121 XM_005263122 XM_006714259 XP_005263177 XP_005263178 XP_005263179 XP_006714322	overlaps 3'	overlaps 3'	84755	inside exon	0	12	12	overlaps 3'UTR		88873	38630	0	TRUE
172	chr5	87960309	87963880	3572		33.063955	118104.45	3667119	3670690	1631	33329	1.9665053	4.0631424	0.6184969	2.7506557	0.6531086	3.7979151	0.7674231	-2.7157576	-0.5628204	-2.6372010	-0.0973883	-2.404502e+00	2e-07	TRUE	2.17e-05	TRUE	LINC00461	NR_015436 NR_024383 NR_024384	NA	NA	0	NA	NA	NA	4	NA		0	0	0	TRUE
173	chr5	176019433	176026882	7450		15.844504	118041.56	8342108	8349557	3553	14528	1.7929433	3.5659796	0.8310919	2.1187851	0.5302939	1.9140071	0.9002301	-2.1012186	-0.7510612	-2.7494343	-0.8977023	-1.985933e+00	2e-07	TRUE	2.17e-05	TRUE	CDHR2	NM_001171976 NM_017675 NP_001165447 NP_060145 XM_006714887 XP_006714950	overlaps 3'	overlaps 3'	27126	covers exon(s)	0	31	31	overlaps 3'UTR		30462	30319	0	TRUE
174	chr8	134467104	134472184	5081		23.050165	117117.89	6209952	6215032	2608	11233	0.6078433	1.2628581	0.3090053	0.5016539	0.2090462	0.2169275	0.2480137	-2.0309889	-1.3319284	-2.5947990	-2.5414078	-2.348201e+00	2e-07	TRUE	2.17e-05	TRUE	ST3GAL1	NM_003033 NM_173344 NP_003024 NP_775479 XM_005251023 XM_005251024 XM_005251025 XM_006716617 XP_005251080 XP_005251081 XP_005251082 XP_006716680	overlaps exon upstream	inside	111999	overlaps exon upstream	0	9	9	overlaps 3'UTR		117092	16260	0	TRUE
175	chr1	24795470	24800082	4613		25.326748	116832.29	2402460	2407072	805	23163	1.2675917	0.2332327	1.8041653	0.4324181	2.1574843	0.5611307	3.3254712	2.9514894	0.8906569	3.2095080	1.2665666	3.833717e+00	2e-07	TRUE	2.17e-05	TRUE	NIPAL3	NM_020448 NP_065181 XM_005245947 XM_005245948 XM_006710780 XP_005246004 XP_005246005 XP_006710843	overlaps 3'	overlaps 3'	53225	overlaps exon upstream	0	13	13	overlaps 3'UTR		57228	27046	0	TRUE
176	chr11	113279247	113281645	2399		48.672934	116766.37	7129962	7132360	2687	14421	0.1845527	0.0211306	0.0468394	0.5519707	0.7602584	0.0429923	0.0256400	1.1483912	4.7071876	5.1690858	1.0247468	2.790669e-01	2e-07	TRUE	2.17e-05	TRUE	DRD2	NM_000795 NM_016574 NP_000786 NP_057658 XM_005271425 XM_006718774 XP_005271482 XP_006718837	overlaps 3'	overlaps 3'	64356	overlaps exon upstream	0	7	7	overlaps 3'UTR		65684	13924	0	TRUE
177	chr1	61920970	61927676	6707		17.404335	116730.88	5657592	5664298	2166	7491	1.1583718	2.4405139	0.3242951	1.2822258	0.3982633	1.4583991	1.5204440	-2.9118056	-0.9285347	-2.6153905	-0.7427994	-6.826923e-01	2e-07	TRUE	2.17e-05	TRUE	NFIA	NM_001134673 NM_001145511 NM_001145512 NM_005595 NP_001128145 NP_001138983 NP_001138984 NP_005586	NA	NA	0	NA	NA	NA	3	NA		0	0	0	TRUE
178	chr6	30691170	30693202	2033		57.406924	116708.28	1807559	1809591	736	19503	61.5345464	131.6161867	14.5530707	112.0820984	13.2774260	66.4232872	12.0777127	-3.1769414	-0.2317811	-3.3092895	-0.9865759	-3.445918e+00	2e-07	TRUE	2.17e-05	TRUE	TUBB	NM_178014 NP_821133	overlaps 3'	overlaps 3'	1747	inside exon	0	4	4	overlaps 3'UTR		3772	1429	0	TRUE
179	chr15	82334170	82337727	3558		32.798773	116698.03	4423269	4426826	2017	4907	0.8012801	1.8224835	0.1257706	1.4743222	0.0837410	0.8995338	0.1860992	-3.8570394	-0.3058539	-4.4438278	-1.0186563	-3.291762e+00	2e-07	TRUE	2.17e-05	TRUE	MEX3B	NM_032246 NP_115622	overlaps exon upstream	inside	757	overlaps exon upstream	0	2	2	overlaps 3'UTR		4365	2545	0	TRUE
180	chr3	191112032	191116453	4422		26.279969	116210.02	9925435	9929856	4193	9172	0.9635375	2.0546280	0.3044442	1.2099300	0.3118364	1.2002158	0.4843199	-2.7546275	-0.7639536	-2.7200161	-0.7755834	-2.084845e+00	2e-07	TRUE	2.17e-05	TRUE	CCDC50	NM_174908 NM_178335 NP_777568 NP_848018	inside exon	inside	65158	inside exon	0	11	11	3'UTR		69585	62085	0	TRUE
181	chr17	53398021	53402427	4407		26.314476	115967.90	5206366	5210772	1882	4407	1.2474908	0.1306547	2.4329676	0.1040665	1.3851566	0.1990441	1.0897944	4.2188864	-0.3282533	3.4062184	0.6073290	3.060225e+00	2e-07	TRUE	2.17e-05	TRUE	HLF	NM_002126 NP_002117 XM_005257269 XP_005257326	overlaps 3'	overlaps 3'	53045	overlaps exon upstream	0	3	3	overlaps 3'UTR		57450	53089	0	TRUE
182	chr7	106297208	106301594	4387		26.180338	114853.14	5871317	5875703	2485	6753	0.4096012	0.9290116	0.1000679	0.5939103	0.0825786	0.5190189	0.0321110	-3.2147169	-0.6454515	-3.4918561	-0.8399097	-4.854557e+00	2e-07	TRUE	2.17e-05	TRUE	CCDC71L	NM_175884 NP_787080	overlaps 3'	overlaps 3'	40	inside exon	0	1	1	overlaps 5' UTR		4423	707	0	TRUE
183	chr15	80487837	80494360	6524		17.540844	114436.47	4278677	4285200	1964	8246	0.2750093	0.0463079	0.2746669	0.1612779	0.8486392	0.8728416	0.2513488	2.5683516	1.8002174	4.1958200	4.2363885	2.440359e+00	2e-07	TRUE	2.17e-05	TRUE	FAH	NM_000137 NP_000128	downstream	downstream	42604	NA	NA	NA	14	NA		33691	33154	0	TRUE
184	chr19	31765847	31770664	4818		23.736835	114364.07	4070452	4075269	1288	7593	0.9349461	2.3724321	0.3380479	0.4358802	0.1184113	0.1488424	0.0470549	-2.8110674	-2.4443631	-4.3244878	-3.9945090	-5.655878e+00	2e-07	TRUE	2.17e-05	TRUE	TSHZ3	NM_020856 NP_065907	overlaps 3'	overlaps 3'	69526	overlaps exon upstream	0	2	2	overlaps 3'UTR		74339	72672	0	TRUE
185	chr11	35272751	35282515	9765		11.698144	114232.38	2202324	2212088	883	14556	9.9572999	2.9036849	16.4524612	2.8455814	16.2211114	1.8831016	1.8555295	2.5023466	-0.0291614	2.4819159	-0.6247741	-6.460540e-01	2e-07	TRUE	2.17e-05	TRUE	SLC1A2	NM_001195728 NM_001252652 NM_004171 NP_001182657 NP_001239581 NP_004162 XM_005253066 XM_005253067 XM_006718277 XP_005253123 XP_005253124 XP_006718340	overlaps 3'	overlaps 3'	159095	overlaps exon upstream	0	12	12	overlaps 3'UTR		168858	56612	0	TRUE
186	chr7	22981160	22985783	4624		24.672629	114086.24	1257475	1262098	546	5932	0.5352153	1.1370093	0.1739302	0.6779357	0.2634019	0.3343172	0.0771548	-2.7086637	-0.7460238	-2.1099063	-1.7659545	-3.881344e+00	2e-07	TRUE	2.17e-05	TRUE	FAM126A	NM_032581 NP_115970 XM_005249894 XM_005249895 XM_006715799 XM_006715800 XP_005249951 XP_005249952 XP_006715862 XP_006715863	overlaps exon upstream	inside	67987	overlaps exon upstream	0	11	11	3'UTR		72892	29811	0	TRUE
187	chr15	55833212	55839345	6134		18.540104	113725.00	2355283	2361416	1052	10106	0.2418870	0.4382056	0.0648261	0.4955102	0.0665252	0.5574743	0.2708359	-2.7569603	0.1773069	-2.7196354	0.3472974	-6.941887e-01	2e-07	TRUE	2.17e-05	TRUE	PYGO1	NM_015617 NP_056432 XM_005254300 XP_005254357	overlaps 3'	overlaps 3'	41705	inside exon	0	3	3	inside transcription region		42829	42829	0	TRUE
188	chr1	108023231	108027542	4312		26.364130	113682.13	7750605	7754916	3166	19313	0.2512958	0.0562130	0.1850735	0.4555706	0.8208704	0.1049076	0.0795025	1.7191219	3.0186985	3.8681782	0.9001426	5.000959e-01	2e-07	TRUE	2.17e-05	TRUE	NTNG1	NM_001113226 NM_001113228 NM_014917 NP_001106697 NP_001106699 NP_055732 XM_006710454 XM_006710455 XM_006710456 XM_006710457 XP_006710517 XP_006710518 XP_006710519 XP_006710520	overlaps 3'	overlaps 3'	85455	overlaps exon upstream	0	2	2	overlaps 3'UTR		86699	85667	0	TRUE
189	chr6	50813065	50815435	2371		47.739204	113189.65	3657972	3660342	1300	13327	0.0247489	0.0022819	0.0004253	0.0019340	0.0011142	0.7964150	0.2800564	-2.4236013	-0.2386586	-1.0341723	8.4471377	6.939335e+00	2e-07	TRUE	2.17e-05	TRUE	TFAP2B	NM_003221 NP_003212 XM_006715176 XM_006715177 XM_006715178 XP_006715239 XP_006715240 XP_006715241	overlaps 3'	overlaps 3'	26626	inside exon	0	7	7	3'UTR		28887	24500	0	TRUE
190	chr6	34500194	34504021	3828		29.553608	113131.21	2464345	2468172	871	18090	2.9099067	0.3274160	5.4031242	0.2639204	3.7317457	0.2174298	3.3841952	4.0445973	-0.3110218	3.5106541	-0.5905747	3.369616e+00	2e-07	TRUE	2.17e-05	TRUE	PACSIN1	NM_001199583 NM_020804 NP_001186512 NP_065855	overlaps 3'	overlaps 3'	17545	overlaps exon upstream	0	10	10	overlaps 3'UTR		20351	6224	0	TRUE
191	chr8	125563027	125565937	2911		38.757819	112824.01	5883811	5886721	2476	11838	2.7405136	4.6103529	0.9186022	5.1874364	1.1082076	6.1685469	3.9291544	-2.3273650	0.1701446	-2.0566491	0.4200535	-2.306583e-01	2e-07	TRUE	2.17e-05	TRUE	MTSS1	NM_001282971 NM_001282974 NM_014751 NP_001269900 NP_001269903 NP_055566 XM_005251111 XM_005251113 XM_005251118 XM_006716700 XM_006716701 XM_006716702 XM_006716703 XM_006716704 XM_006716705 XM_006716706 XM_006716707 XP_005251168 XP_005251170 XP_005251175 XP_006716763 XP_006716764 XP_006716765 XP_006716766 XP_006716767 XP_006716768 XP_006716769 XP_006716770	overlaps 3'	overlaps 3'	174793	overlaps exon upstream	0	15	15	overlaps 3'UTR		177702	174963	0	TRUE
192	chr1	213161846	213164926	3081		36.578650	112698.82	13702128	13705208	5372	10553	0.5789284	1.4443373	0.0151775	0.9555074	0.0281886	1.2199912	0.0875745	-6.5723285	-0.5960688	-5.6791523	-0.2435370	-4.043753e+00	2e-07	TRUE	2.17e-05	TRUE	VASH2	NM_001136474 NM_001136475 NM_024749 NP_001129946 NP_001129947 NP_079025 XM_006711541 XP_006711604 XR_247041	overlaps exon upstream	inside	37165	overlaps exon upstream	0	7	7	overlaps 3'UTR		40246	37041	0	TRUE
193	chr15	91835594	91844692	9099		12.352490	112395.30	5170416	5179514	2325	26522	1.2288264	0.2318054	2.2371676	0.3032000	1.1301648	0.7293701	1.8458649	3.2706876	0.3873559	2.2855474	1.6537372	2.993311e+00	2e-07	TRUE	2.17e-05	TRUE	SV2B	NM_001167580 NM_014848 NP_001161052 NP_055663 XM_005254997 XM_005254998 XP_005255054 XP_005255055	overlaps 3'	overlaps 3'	192412	overlaps exon upstream	0	12	12	overlaps 3'UTR		201357	40731	0	TRUE
194	chr1	87209605	87213856	4252		26.398125	112244.83	6818406	6822657	2756	5966	1.1669085	1.9126130	0.5168530	2.2186471	0.5946036	2.5142017	0.5201047	-1.8877191	0.2141352	-1.6855450	0.3945554	-1.878671e+00	2e-07	TRUE	2.17e-05	TRUE	SH3GLB1	NM_001206651 NM_001206652 NM_001206653 NM_016009 NP_001193580 NP_001193581 NP_001193582 NP_057093 XM_006710672 XM_006710673 XP_006710735 XP_006710736	inside exon	inside	39352	inside exon	0	8	8	3'UTR		43614	23642	0	TRUE
195	chr6	34026748	34029809	3062		36.651998	112228.42	2364524	2367585	857	144560	0.1221213	0.0125786	0.0199355	0.0293755	0.0447075	0.1052286	2.3157200	0.6643710	1.2236447	1.8295456	3.0644854	7.524347e+00	2e-07	TRUE	2.17e-05	TRUE	GRM4	NM_000841 NM_001256809 NM_001256810 NM_001256811 NM_001256812 NM_001256813 NM_001256814 NM_001282847 NP_000832 NP_001243738 NP_001243740 NP_001243741 NP_001243742 NP_001269776 XM_006715071 XP_006715134 XR_427829	covers exon(s)	inside	93590	covers exon(s)	0	4	9	inside transcription region		133776	132569	0	TRUE
196	chr14	24897956	24898718	763		146.753306	111972.77	579212	579974	141	34874	0.5291608	0.0166831	0.0405593	0.0200995	0.0477748	0.0276278	11.5751501	1.2816449	0.2687688	1.5178630	0.7277325	9.438428e+00	2e-07	TRUE	2.17e-05	TRUE	CBLN3	NM_001039771 NP_001034860	overlaps exon downstream	inside	13	overlaps exon downstream	0	1	3	overlaps 5' UTR		2991	1265	0	TRUE
197	chr20	49506934	49511052	4119		27.159698	111870.79	3412848	3416966	1364	5454	2.2998869	4.1045320	1.0028285	3.7814104	0.9002970	3.1993667	1.6118171	-2.0331428	-0.1182933	-2.1887448	-0.3594314	-1.348530e+00	2e-07	TRUE	2.17e-05	TRUE	ADNP	NM_001282531 NM_001282532 NM_015339 NM_181442 NP_001269460 NP_001269461 NP_056154 NP_852107 XM_006723759 XP_006723822	overlaps exon upstream	inside	36475	overlaps exon upstream	0	4	4	overlaps 3'UTR		40644	12591	0	TRUE
198	chr6	34003441	34005631	2191		50.952865	111637.73	2343412	2345602	857	144560	0.3118396	0.0473286	0.0724815	0.1050314	0.1851068	0.3356641	5.2941564	0.6149009	1.1500371	1.9675750	2.8262351	6.805546e+00	2e-07	TRUE	2.17e-05	TRUE	GRM4	NM_000841 NM_001256809 NM_001256810 NM_001256811 NM_001256812 NM_001256813 NM_001256814 NM_001282847 NP_000832 NP_001243738 NP_001243740 NP_001243741 NP_001243742 NP_001269776 XM_006715071 XP_006715134 XR_427829	covers exon(s)	inside	117768	covers exon(s)	0	7	9	inside transcription region		133776	132569	0	TRUE
199	chr1	243663024	243667939	4916		22.702758	111606.76	15478632	15483547	6176	5617	4.0659993	8.6402367	1.7995980	3.9280967	1.3056289	2.4199988	1.3004912	-2.2633962	-1.1372404	-2.7263260	-1.8360645	-2.732014e+00	2e-07	TRUE	2.17e-05	TRUE	SDCCAG8	NM_006642 NP_006633 XM_005273013 XM_005273016 XM_005273018 XM_005273021 XM_005273022 XM_005273023 XM_006711727 XM_006711728 XM_006711729 XM_006711730 XM_006724964 XM_006724965 XM_006724966 XM_006724967 XM_006724968 XM_006724969 XM_006724970 XM_006724971 XM_006724972 XM_006724973 XP_005273070 XP_005273073 XP_005273075 XP_005273078 XP_005273079 XP_005273080 XP_006711790 XP_006711791 XP_006711792 XP_006711793 XP_006725027 XP_006725028 XP_006725029 XP_006725030 XP_006725031 XP_006725032 XP_006725033 XP_006725034 XP_006725035 XP_006725036	overlaps 3'	overlaps 3'	213450	overlaps exon upstream	0	11	11	overlaps 3'UTR		213819	213498	0	TRUE
200	chr6	146114766	146119403	4638		24.048236	111535.72	7516725	7521362	3003	10263	0.4563440	0.9839491	0.0816529	0.8983953	0.0763257	0.7238000	0.1016467	-3.5910085	-0.1312334	-3.6883436	-0.4429927	-3.275020e+00	2e-07	TRUE	2.17e-05	TRUE	FBXO30	NM_032145 NP_115521 XM_005267159 XM_006715575 XP_005267216 XP_006715638	overlaps 3'	overlaps 3'	16518	inside exon	0	3	3	3'UTR		16649	6299	0	TRUE
201	chr7	155302411	155305540	3130		35.532545	111216.87	8475556	8478685	3580	8474	0.0139023	0.0002239	0.0004140	0.0003151	0.0005916	0.2199407	0.2411035	0.8866831	0.4927247	1.4014069	9.9397968	1.007233e+01	2e-07	TRUE	2.17e-05	TRUE	CNPY1	NM_001103176 NP_001096646	inside intron	inside	20999	inside intron	619	2	4	5' UTR		32586	5969	0	TRUE
202	chr1	112264449	112270428	5980		18.534981	110839.18	8194600	8200579	3328	14974	0.4793599	0.0923156	0.8611874	0.1981822	0.4407045	0.9495566	0.3971499	3.2216812	1.1021814	2.2551656	3.3626080	2.105038e+00	2e-07	TRUE	2.17e-05	TRUE	FAM212B	NM_019099 NM_198926 NP_061972 NP_945120	overlaps 3'	overlaps 3'	27991	overlaps exon upstream	0	2	2	overlaps 3'UTR		33733	28744	0	TRUE
203	chr17	77906148	77914911	8764		12.639583	110773.31	7382754	7391517	2717	23049	0.6256269	0.9307085	0.3220506	0.9894677	0.4231272	1.2628205	0.7430856	-1.5310418	0.0883232	-1.1372379	0.4402482	-3.248010e-01	2e-07	TRUE	2.17e-05	TRUE	TBC1D16	NM_001271844 NM_001271845 NM_001271846 NM_019020 NP_001258773 NP_001258774 NP_001258775 NP_061893 XM_005257049 XM_005257050 XM_005257052 XM_006721694 XM_006721695 XP_005257106 XP_005257107 XP_005257109 XP_006721757 XP_006721758	overlaps exon upstream	inside	94746	overlaps exon upstream	0	12	12	overlaps 3'UTR		103515	72688	0	TRUE
204	chrX	150156246	150159244	2999		36.845755	110500.42	5419591	5422589	2251	10743	1.1376383	2.0248857	0.3672264	2.6551813	0.3345490	2.3788320	0.1866776	-2.4630986	0.3909699	-2.5975512	0.2324129	-3.439220e+00	2e-07	TRUE	2.17e-05	TRUE	HMGB3	NM_005342 NP_005333 XM_005274665 XM_005274666 XM_005274667 XP_005274722 XP_005274723 XP_005274724	overlaps exon upstream	inside	4353	overlaps exon upstream	0	5	5	overlaps 3'UTR		7355	2314	0	TRUE
205	chr22	36134783	36140299	5517		19.977079	110213.54	1908903	1914419	697	13920	4.6629755	8.3321751	2.1719315	7.1306065	1.6585880	6.6951640	3.6595792	-1.9397146	-0.2246684	-2.3287376	-0.3155738	-1.187015e+00	2e-07	TRUE	2.17e-05	TRUE	RBFOX2	NM_001031695 NM_001082576 NM_001082577 NM_001082578 NM_001082579 NM_014309 NP_001026865 NP_001076045 NP_001076046 NP_001076047 NP_001076048 NP_055124 XM_005261428 XM_005261429 XM_005261430 XM_005261431 XM_005261432 XM_005261433 XM_005261435 XM_005261437 XM_006724185 XM_006724186 XM_006724187 XM_006724188 XM_006724189 XM_006724190 XM_006724191 XM_006724192 XM_006724193 XM_006724194 XP_005261485 XP_005261486 XP_005261487 XP_005261488 XP_005261489 XP_005261490 XP_005261492 XP_005261494 XP_006724248 XP_006724249 XP_006724250 XP_006724251 XP_006724252 XP_006724253 XP_006724254 XP_006724255 XP_006724256 XP_006724257	overlaps exon upstream	inside	284286	overlaps exon upstream	0	14	14	overlaps 3'UTR		289802	284221	0	TRUE
206	chr8	65492485	65497627	5143		21.427679	110202.55	3467884	3473026	1309	13078	1.2128112	2.4864784	0.2578087	2.0980352	0.4249992	1.8753299	0.8617480	-3.2697312	-0.2450650	-2.5485720	-0.4069595	-1.528766e+00	2e-07	TRUE	2.17e-05	TRUE	LOC401463	NR_015374	NA	NA	0	NA	NA	NA	2	NA		0	0	0	TRUE
207	chr5	179338657	179347429	8773		12.548969	110092.11	8821107	8829879	3709	11323	0.9085840	1.6286320	0.4905934	1.0130892	0.3921205	1.0694099	0.8392058	-1.7310610	-0.6848994	-2.0542916	-0.6068457	-9.565641e-01	2e-07	TRUE	2.17e-05	TRUE	TBC1D9B	NM_015043 NM_198868 NP_055858 NP_942568	upstream	upstream	3801	NA	NA	NA	22	NA		45785	44373	0	TRUE
208	chr2	95880084	95887420	7337		15.002434	110072.86	5038096	5045432	2166	23736	0.1418611	0.2885041	0.0408058	0.2455199	0.0328080	0.2128462	0.0731228	-2.8217444	-0.2327520	-3.1364720	-0.4387803	-1.980199e+00	2e-07	TRUE	2.17e-05	TRUE	ZNF2	NM_001017396 NM_001282398 NM_021088 NP_001017396 NP_001269327 NP_066574	downstream	downstream	48901	NA	NA	NA	5	NA		18881	5882	0	TRUE
209	chr21	32490710	32497016	6307		17.428562	109921.94	644330	650636	205	33287	0.5170638	0.1925675	0.4655490	0.2498579	0.4907009	0.7385486	3.9792356	1.2735686	0.3757435	1.3494796	1.9393283	4.369055e+00	2e-07	TRUE	2.17e-05	TRUE	TIAM1	NM_003253 NP_003244 XM_005261037 XM_005261038 XM_005261039 XM_005261040 XP_005261094 XP_005261095 XP_005261096 XP_005261097	overlaps 3'	overlaps 3'	434274	covers exon(s)	0	29	29	overlaps 3'UTR		440554	146602	0	TRUE
210	chr20	33297862	33301223	3362		32.650681	109771.59	1973422	1976783	785	6679	4.2477503	1.1852573	5.8860187	1.3420277	9.3715280	1.3821369	3.6087034	2.3120919	0.1792142	2.9830841	0.2217003	1.606280e+00	2e-07	TRUE	2.17e-05	TRUE	TP53INP2	NM_021202 NP_067025 XM_005260476 XM_006723841 XP_005260533 XP_006723904	inside exon	inside	5714	inside exon	0	5	5	overlaps 3'UTR		9089	1567	0	TRUE
211	chr4	57180203	57182857	2655		41.324493	109716.53	2929444	2932098	1154	9164	1.0446749	2.3704568	0.1558979	1.9200549	0.2214178	0.8082217	0.1418255	-3.9264921	-0.3040175	-3.4203217	-1.5523421	-4.062976e+00	2e-07	TRUE	2.17e-05	TRUE	KIAA1211	NM_020722 NP_065773 XM_005265752 XM_005265754 XM_005265755 XM_005265756 XM_006714044 XM_006714045 XP_005265809 XP_005265811 XP_005265812 XP_005265813 XP_006714107 XP_006714108	overlaps 3'	overlaps 3'	5075	overlaps exon upstream	0	4	4	overlaps 3'UTR		7727	5965	0	TRUE
212	chr9	136333685	136335898	2214		49.411664	109397.42	6357246	6359459	2740	19939	1.0055271	1.9922252	0.2430572	1.9147502	0.2982192	1.7769886	0.6084985	-3.0350129	-0.0572245	-2.7399356	-0.1649462	-1.711055e+00	2e-07	TRUE	2.17e-05	TRUE	CACFD1	NM_001135775 NM_001242369 NM_001242370 NM_017586 NP_001129247 NP_001229298 NP_001229299 NP_060056	inside exon	inside	8598	inside exon	0	5	5	overlaps 3'UTR		10822	8644	0	TRUE
213	chr8	81541350	81549282	7933		13.782521	109336.74	4144049	4151981	1636	16729	0.4393511	0.5994360	0.1923853	0.9743230	0.1809043	1.5568663	0.6739226	-1.6396067	0.7007945	-1.7283790	1.3769675	1.689773e-01	2e-07	TRUE	2.17e-05	TRUE	ZNF704	NM_001033723 NM_032651 NP_001028895 XM_005251279 XM_006716464 XP_005251336 XP_006716527	inside exon	inside	237734	inside exon	0	9	9	3'UTR		246330	180228	0	TRUE
214	chr12	122496995	122499909	2915		37.399975	109020.93	7587419	7590333	3101	2915	2.0083460	4.1038824	0.7766766	2.5377490	0.5922735	2.3434815	1.1783154	-2.4016036	-0.6934400	-2.7926540	-0.8083360	-1.800264e+00	2e-07	TRUE	2.17e-05	TRUE	BCL7A	NM_001024808 NM_020993 NP_001019979 NP_066273	overlaps exon upstream	inside	37134	overlaps exon upstream	0	6	6	overlaps 3'UTR		40089	37071	0	TRUE
215	chr9	38406522	38409218	2697		40.415382	109000.28	1869123	1871819	815	12585	4.1562152	9.1746069	0.2308477	8.2480410	0.3229586	17.9414148	1.2975339	-5.3126328	-0.1535949	-4.8282252	0.9675754	-2.821874e+00	2e-07	TRUE	2.17e-05	TRUE	IGFBPL1	NM_001007563 NP_001007564	overlaps 3'	overlaps 3'	15226	overlaps exon upstream	0	5	5	3'UTR		17919	13024	0	TRUE
216	chr9	129643691	129648051	4361		24.990286	108982.64	5375545	5379905	2424	6475	0.4618900	0.9899319	0.1433930	0.5832934	0.1170968	0.6244390	0.2939358	-2.7873549	-0.7631076	-3.0796278	-0.6647685	-1.751828e+00	2e-07	TRUE	2.17e-05	TRUE	ZBTB34	NM_001099270 NM_203482 NP_001092740 XM_005251989 XP_005252046	inside exon	inside	20747	inside exon	0	2	2	3'UTR		25212	1502	0	TRUE
217	chr18	59418987	59420933	1947		55.925204	108886.37	2625841	2627787	1249	10251	0.0185607	0.0002488	0.0004302	0.0002871	0.0011366	0.0041045	0.4191604	0.7898022	0.2065896	2.1916019	4.0440722	1.071823e+01	2e-07	TRUE	2.17e-05	TRUE	RP11-1096D5.1	NR_103449	NA	NA	0	NA	NA	NA	4	NA		0	0	0	TRUE
218	chr1	37261141	37269017	7877		13.814470	108816.58	3771200	3779076	1319	10790	1.2502077	2.8609143	0.4991162	1.0146389	0.3301271	0.3027070	0.2633339	-2.5190285	-1.4955099	-3.1153826	-3.2404824	-3.441511e+00	2e-07	TRUE	2.17e-05	TRUE	GRIK3	NM_000831 NP_000822	overlaps exon upstream	inside	230827	overlaps exon upstream	0	16	16	overlaps 3'UTR		238716	232257	0	TRUE
219	chr5	137085656	137090080	4425		24.581725	108774.13	5784238	5788662	2573	8692	3.7736578	6.9608103	1.4230810	6.7663147	1.1595844	5.7427403	2.5018908	-2.2902374	-0.0408850	-2.5856474	-0.2775160	-1.476236e+00	2e-07	TRUE	2.17e-05	TRUE	MYOT	NM_001135940 NM_006790 NP_001129412 NP_006781 XM_005272129 XP_005272186	inside intron	inside	63246	inside intron	-63231	1	10	5' UTR		201130	16733	0	TRUE
220	chr3	39554656	39558079	3424		31.751565	108717.36	2222991	2226414	893	33241	1.3188923	0.0533220	2.1046053	0.0292042	3.2389839	0.0355161	0.9060528	5.3026752	-0.8685560	5.9246668	-0.5862573	4.086792e+00	2e-07	TRUE	2.17e-05	TRUE	MOBP	NM_001278322 NM_001278323 NM_182935 NP_001265251 NP_001265252 NP_891980 NR_003090 NR_103504 NR_103505 NR_103506	overlaps 3'	overlaps 3'	33125	overlaps exon upstream	0	4	4	overlaps 3'UTR		35963	11313	0	TRUE
221	chr7	139246316	139256953	10638		10.183355	108330.53	7464951	7475588	3237	14375	1.5118672	0.5377851	1.8934502	0.9315986	3.2710032	0.9588926	1.2414244	1.8159158	0.7926787	2.6046315	0.8343395	1.206895e+00	2e-07	TRUE	2.17e-05	TRUE	HIPK2	NM_001113239 NM_022740 NP_001106710 NP_073577 XM_006715934 XM_006715935 XM_006715936 XP_006715997 XP_006715998 XP_006715999	inside exon	inside	220740	inside exon	0	15	15	3'UTR		231377	219749	0	TRUE
222	chr6	33986373	33988294	1922		56.282488	108174.94	2328489	2330410	857	144560	0.0373239	0.0017310	0.0058437	0.0036413	0.0161828	0.0177471	0.7353268	1.7552972	1.0728702	3.2248004	3.3579211	8.730648e+00	2e-07	TRUE	2.17e-05	TRUE	GRM4	NM_000841 NM_001256809 NM_001256810 NM_001256811 NM_001256812 NM_001256813 NM_001256814 NM_001282847 NP_000832 NP_001243738 NP_001243740 NP_001243741 NP_001243742 NP_001269776 XM_006715071 XP_006715134 XR_427829	downstream	downstream	42722	NA	NA	NA	8	NA		41393	36255	0	TRUE
223	chr1	202559722	202566094	6373		16.922563	107847.50	12766900	12773272	5055	20153	0.3460662	0.0204503	0.4574878	0.0862079	0.2934025	0.8178808	2.2976942	4.4835383	2.0756974	3.8426861	5.3216955	6.811920e+00	2e-07	TRUE	2.17e-05	TRUE	SYT2	NM_001136504 NM_177402 NP_001129976 NP_796376	overlaps 3'	overlaps 3'	113457	overlaps exon upstream	0	9	9	overlaps 3'UTR		119826	9015	0	TRUE
224	chr9	98785553	98788284	2732		39.354248	107515.80	3444836	3447567	1537	15711	0.0368215	0.0014614	0.0087245	0.0039552	0.0122060	0.3158084	0.6111432	2.5777254	1.4363942	3.0621813	7.7555649	8.708026e+00	2e-07	TRUE	2.17e-05	TRUE	LINC00092	NR_024129	NA	NA	0	NA	NA	NA	2	NA		0	0	0	TRUE
225	chr9	101911461	101916364	4904		21.922038	107505.68	3753855	3758758	1695	11552	0.6115049	1.2321017	0.1264689	1.0933936	0.2801247	0.9517467	0.3330354	-3.2842669	-0.1723084	-2.1369803	-0.3724718	-1.887374e+00	2e-07	TRUE	2.17e-05	TRUE	TGFBR1	NM_001130916 NM_004612 NP_001124388 NP_004603 XM_005252150 XP_005252207	overlaps exon upstream	inside	21263	overlaps exon upstream	0	9	9	overlaps 3'UTR		26275	20340	0	TRUE
226	chr15	81584893	81589421	4529		23.605641	106909.95	4380062	4384590	2004	45749	0.0329364	0.0276116	0.0086851	0.0092895	0.0060244	0.0093862	0.4414009	-1.6686576	-1.5715958	-2.1963850	-1.5566660	3.998742e+00	2e-07	TRUE	2.17e-05	TRUE	IL16	NM_001172128 NM_004513 NM_172217 NP_001165599 NP_004504 NP_757366 XM_005254342 XM_005254343 XM_005254344 XM_005254345 XM_005254346 XP_005254399 XP_005254400 XP_005254401 XP_005254402 XP_005254403 XR_429452	overlaps 5'	overlaps 5'	0	overlaps exon downstream	0	1	6	5' UTR		9617	7114	0	TRUE
227	chr2	74327520	74335179	7660		13.954764	106893.49	4189819	4197478	1866	8780	0.3928619	0.7021861	0.1833746	0.6050607	0.1181419	0.5742223	0.3554097	-1.9370597	-0.2147737	-2.5713329	-0.2902441	-9.823705e-01	2e-07	TRUE	2.17e-05	TRUE	TET3	NM_001287491 NM_144993 NP_001274420 XM_005264187 XM_006711963 XP_005264244 XP_006712026	inside exon	inside	54115	inside exon	0	9	9	overlaps 3'UTR		61897	55853	0	TRUE
228	chr19	58197837	58201984	4148		25.505335	105796.13	8294751	8298898	2610	22972	0.2189253	0.4444705	0.0611211	0.3549398	0.0557510	0.3725134	0.1632200	-2.8623440	-0.3245131	-2.9950179	-0.2547951	-1.445269e+00	2e-07	TRUE	2.17e-05	TRUE	ZNF551	NM_001270938 NM_138347 NP_001257867 NP_612356 NR_073102	overlaps 3'	overlaps 3'	4500	overlaps exon upstream	0	3	3	overlaps 3'UTR		7832	3023	0	TRUE
229	chr1	200938513	200943327	4815		21.909482	105494.15	12581402	12586216	4988	24593	3.9905301	7.4440825	2.0385978	6.0407439	1.3480256	3.7112446	0.2643828	-1.8685169	-0.3013678	-2.4652461	-1.0041910	-4.815394e+00	2e-07	TRUE	2.17e-05	TRUE	KIF21B	NM_001252100 NM_001252102 NM_001252103 NM_017596 NP_001239029 NP_001239031 NP_001239032 NP_060066	overlaps 3'	overlaps 3'	49501	overlaps exon upstream	0	34	34	overlaps 3'UTR		54314	49862	0	TRUE
230	chr1	25890125	25895381	5257		20.049243	105398.87	2498444	2503700	833	64867	0.1667828	0.0323576	0.1452553	0.0368538	0.2142918	0.1115810	1.5203648	2.1664158	0.1877111	2.7274011	1.7859162	5.554170e+00	2e-07	TRUE	2.17e-05	TRUE	LDLRAP1	NM_015627 NP_056442 XM_006710558 XM_006710559 XM_006710560 XM_006710561 XM_006710562 XP_006710621 XP_006710622 XP_006710623 XP_006710624 XP_006710625 XR_426598	overlaps 3'	overlaps 3'	827	covers exon(s)	0	4	4	overlaps 3'UTR		6079	3944	0	TRUE
231	chr22	43593287	43597094	3808		27.516812	104784.02	2990003	2993810	1063	6871	0.5840995	1.6807096	0.0617365	0.3220991	0.0310593	0.0392715	0.0030676	-4.7668024	-2.3834938	-5.7579022	-5.4194455	-9.097743e+00	2e-07	TRUE	2.17e-05	TRUE	SCUBE1	NM_173050 NP_766638 XM_005261752 XP_005261809	downstream	downstream	142300	NA	NA	NA	22	NA		140165	139264	0	TRUE
232	chr15	45456681	45460365	3685		28.242326	104072.97	1746539	1750223	764	42616	0.4976528	0.7013737	0.1487685	0.6216377	0.1657646	1.3874084	2.6529917	-2.2371138	-0.1741092	-2.0810475	0.9841374	1.919365e+00	2e-07	TRUE	2.17e-05	TRUE	SHF	NM_138356 NP_612365 XM_005254765 XM_005254767 XM_005254769 XM_005254770 XM_005254771 XM_006720740 XM_006720741 XM_006720742 XP_005254822 XP_005254824 XP_005254826 XP_005254827 XP_005254828 XP_006720803 XP_006720804 XP_006720805	overlaps 3'	overlaps 3'	33008	overlaps exon upstream	0	8	8	overlaps 3'UTR		33961	31127	0	TRUE
233	chr20	31022231	31027121	4891		21.270133	104032.22	1775068	1779958	691	11191	0.8292371	1.3752700	0.4130097	1.3586772	0.3907922	1.1777314	0.6625936	-1.7354672	-0.0175122	-1.8152413	-0.2237043	-1.053519e+00	2e-07	TRUE	2.17e-05	TRUE	ASXL1	NM_001164603 NM_015338 NP_001158075 NP_056153 XM_006723727 XM_006723728 XM_006723729 XM_006723730 XM_006723731 XM_006723732 XM_006723733 XP_006723790 XP_006723791 XP_006723792 XP_006723793 XP_006723794 XP_006723795 XP_006723796	overlaps exon upstream	inside	65413	overlaps exon upstream	0	9	9	overlaps 3'UTR		70304	68292	0	TRUE
234	chr22	44888464	44893811	5348		19.436087	103944.19	3120707	3126054	1115	5796	2.3042608	3.9370607	1.2352714	3.5128093	1.0440726	2.9151929	1.0900572	-1.6722909	-0.1644937	-1.9148969	-0.4335276	-1.852715e+00	2e-07	TRUE	2.17e-05	TRUE	LDOC1L	NM_032287 NP_115663	overlaps exon upstream	inside	194	overlaps exon upstream	0	2	2	overlaps 5' UTR		5555	719	0	TRUE
235	chr4	126369611	126373968	4358		23.841014	103899.14	5663454	5667811	2456	6521	0.4695006	1.2660047	0.0300773	0.5128179	0.0390505	0.3694018	0.0207816	-5.3954637	-1.3037642	-5.0187984	-1.7770202	-5.928833e+00	2e-07	TRUE	2.17e-05	TRUE	FAT4	NM_024582 NP_078858 XM_005263210 XM_006714304 XP_005263267 XP_006714367	overlaps 5'	overlaps 5'	0	overlaps exon downstream	0	1	9	overlaps 5' UTR		43327	43185	0	TRUE
236	chr5	153432478	153436916	4439		23.353508	103666.22	7335750	7340188	3106	7809	0.7448402	1.3842616	0.2945216	1.1926101	0.2330053	1.1488794	0.6234946	-2.2326712	-0.2149942	-2.5706818	-0.2688892	-1.150668e+00	2e-07	TRUE	2.17e-05	TRUE	MFAP3	NM_001135037 NM_001242336 NM_005927 NP_001128509 NP_001229265 NP_005918	overlaps exon upstream	inside	13959	overlaps exon upstream	0	2	2	overlaps 3'UTR		18495	650	0	TRUE
237	chr20	1917758	1921225	3468		29.851002	103523.28	234045	237512	69	19185	3.0337299	0.5824641	5.0570908	0.8190140	4.0446289	1.5178234	4.8669114	3.1180666	0.4917190	2.7957663	1.3817629	3.062765e+00	2e-07	TRUE	2.17e-05	TRUE	SIRPA	NM_001040022 NM_001040023 NM_080792 NP_001035111 NP_001035112 NP_542970 XM_005260669 XM_005260670 XM_006723545 XM_006723546 XM_006723547 XP_005260726 XP_005260727 XP_006723608 XP_006723609 XP_006723610	overlaps 3'	overlaps 3'	41673	overlaps exon upstream	0	8	8	overlaps 3'UTR		44455	42120	0	TRUE
238	chr9	20343226	20346577	3352		30.787387	103199.32	896682	900033	442	9409	0.7724294	1.7170986	0.1899487	1.0892562	0.2418253	0.7277681	0.1956123	-3.1762913	-0.6566295	-2.8279357	-1.2384222	-3.133904e+00	2e-07	TRUE	2.17e-05	TRUE	MLLT3	NM_001286691 NM_004529 NP_001273620 NP_004520	overlaps 3'	overlaps 3'	275937	overlaps exon upstream	0	11	11	overlaps 3'UTR		277546	275814	0	TRUE
239	chr15	43813518	43821706	8189		12.569612	102932.55	1562818	1571006	696	30373	4.1819606	1.1835272	7.0063153	1.4545274	5.2655608	1.3270727	4.0579551	2.5655630	0.2974576	2.1534943	0.1651546	1.777660e+00	2e-07	TRUE	2.17e-05	TRUE	MAP1A	NM_002373 NP_002364 XM_005254385 XP_005254442	overlaps exon upstream	inside	3712	overlaps exon upstream	0	4	6	overlaps 5' UTR		14012	8750	0	TRUE
240	chr20	31030862	31035200	4339		23.708323	102870.41	1780114	1784452	692	4758	1.4347447	2.6892853	0.6294875	2.0381034	0.5187032	2.4659882	0.7973949	-2.0949731	-0.3999956	-2.3742416	-0.1250569	-1.753856e+00	2e-07	TRUE	2.17e-05	TRUE	C20orf112	NM_001256798 NM_080616 NP_001243727 NP_542183 XM_005260282 XM_005260283 XM_005260284 XM_005260285 XM_005260286 XM_005260288 XM_005260289 XM_005260290 XM_006723702 XM_006723703 XP_005260339 XP_005260340 XP_005260341 XP_005260342 XP_005260343 XP_005260345 XP_005260346 XP_005260347 XP_006723765 XP_006723766	inside exon	inside	137675	inside exon	0	11	11	3'UTR		142013	137293	0	TRUE
241	chr14	99635624	99639911	4288		23.976424	102810.90	4707743	4712030	1957	8977	1.7550419	4.1369499	0.1536266	3.2820910	0.4976018	0.1493007	0.0046561	-4.7510677	-0.3339523	-3.0555038	-4.7922746	-9.795238e+00	2e-07	TRUE	2.17e-05	TRUE	BCL11B	NM_001282237 NM_001282238 NM_022898 NM_138576 NP_001269166 NP_001269167 NP_075049 NP_612808	overlaps 3'	overlaps 3'	97911	inside exon	0	3	3	3'UTR		102197	97067	0	TRUE
242	chr8	38705473	38710537	5065		20.272787	102681.67	2328349	2333413	841	6324	1.1049749	0.3028553	1.8313937	0.4099701	1.4718491	0.4962276	0.9691548	2.5962414	0.4368900	2.2809293	0.7123734	1.678098e+00	2e-07	TRUE	2.17e-05	TRUE	TACC1	NM_001122824 NM_001146216 NM_006283 NP_001116296 NP_001139688 NP_006274 XM_005273622 XM_005273624 XM_005273625 XM_005273626 XM_005273627 XM_005273628 XM_005273629 XM_005273630 XM_005273631 XP_005273679 XP_005273681 XP_005273682 XP_005273683 XP_005273684 XP_005273685 XP_005273686 XP_005273687 XP_005273688	NA	NA	0	NA	NA	NA	10	NA		0	0	0	TRUE
243	chr22	27733064	27738814	5751		17.838833	102591.13	1207979	1213729	410	13504	0.1312777	0.1316128	0.0588978	0.2666986	0.2974202	0.0047781	0.0010216	-1.1600129	1.0189105	1.1762032	-4.7837335	-7.009321e+00	2e-07	TRUE	2.17e-05	TRUE	MN1	NM_002430 NP_002421	downstream	downstream	449057	NA	NA	NA	2	NA		43606	40907	0	TRUE
244	chr15	81591645	81592816	1172		87.434117	102472.79	4385975	4387146	2004	45749	0.1260529	0.0531051	0.0266669	0.0320182	0.0307880	0.0446392	2.1098257	-0.9938009	-0.7299587	-0.7864791	-0.2505383	5.312131e+00	2e-07	TRUE	2.17e-05	TRUE	IL16	NM_001172128 NM_004513 NM_172217 NP_001165599 NP_004504 NP_757366 XM_005254342 XM_005254343 XM_005254344 XM_005254345 XM_005254346 XP_005254399 XP_005254400 XP_005254401 XP_005254402 XP_005254403 XR_429452	overlaps 5'	overlaps 5'	0	inside exon	0	1	5	overlaps 5' UTR		7472	7237	0	TRUE
245	chr6	30610542	30612456	1915		53.466816	102388.95	1778102	1780016	731	25357	5.0363457	10.7879482	1.1364589	8.9729375	1.1243053	7.7843021	0.9675323	-3.2468031	-0.2657682	-3.2623147	-0.4707809	-3.478967e+00	2e-07	TRUE	2.17e-05	TRUE	ATAT1	NM_001031722 NM_001190724 NM_001254952 NM_024909 NP_001026892 NP_001241881 NP_079185 NR_033821 NR_033823 XM_005249414 XM_005249415 XM_005249416 XM_005249417 XM_005249418 XM_005249419 XM_005249420 XM_005249421 XM_005249422 XM_005272895 XM_005272896 XM_005272897 XM_005272898 XM_005272899 XM_005272900 XM_005272901 XM_005272902 XM_005272903 XM_005275050 XM_005275051 XM_005275052 XM_005275053 XM_005275054 XM_005275055 XM_005275056 XM_005275057 XM_005275058 XM_005275185 XM_005275186 XM_005275187 XM_005275188 XM_005275189 XM_005275190 XM_005275191 XM_005275192 XM_005275193 XM_005275307 XM_005275308 XM_005275309 XM_005275310 XM_005275311 XM_005275312 XM_005275313 XM_005275314 XM_005275315 XM_005275480 XM_005275481 XM_005275482 XM_005275483 XM_005275484 XM_005275485 XM_005275486 XM_005275487 XM_005275488 XM_005275611 XM_005275612 XM_005275613 XM_005275614 XM_005275615 XM_005275616 XM_005275617 XM_005275618 XM_005275619 XM_006715214 XM_006725528 XM_006725747 XM_006725854 XM_006725943 XM_006726044 XM_006726132 XP_005249471 XP_005249472 XP_005249473 XP_005249474 XP_005249475 XP_005249476 XP_005249477 XP_005249478 XP_005249479 XP_005272952 XP_005272953 XP_005272954 XP_005272955 XP_005272956 XP_005272957 XP_005272958 XP_005272959 XP_005272960 XP_005275107 XP_005275108 XP_005275109 XP_005275110 XP_005275111 XP_005275112 XP_005275113 XP_005275114 XP_005275115 XP_005275242 XP_005275243 XP_005275244 XP_005275245 XP_005275246 XP_005275247 XP_005275248 XP_005275249 XP_005275250 XP_005275364 XP_005275365 XP_005275366 XP_005275367 XP_005275368 XP_005275369 XP_005275370 XP_005275371 XP_005275372 XP_005275537 XP_005275538 XP_005275539 XP_005275540 XP_005275541 XP_005275542 XP_005275543 XP_005275544 XP_005275545 XP_005275668 XP_005275669 XP_005275670 XP_005275671 XP_005275672 XP_005275673 XP_005275674 XP_005275675 XP_005275676 XP_006715277 XP_006725591 XP_006725810 XP_006725917 XP_006726006 XP_006726107 XP_006726195 XR_241917 XR_241918 XR_241919 XR_241920 XR_246968 XR_246969 XR_246970 XR_246971 XR_247355 XR_247356 XR_247357 XR_247358 XR_247376 XR_247377 XR_247378 XR_247379 XR_247391 XR_247392 XR_247393 XR_247394 XR_247407 XR_247408 XR_247409 XR_247410 XR_247428 XR_247429 XR_247430 XR_247431	covers exon(s)	inside	15879	covers exon(s)	0	10	13	inside transcription region		19935	19439	0	TRUE
246	chr2	164459127	164468316	9190		11.127326	102260.12	8281769	8290958	3612	9844	0.0735021	0.0327365	0.0470828	0.2796752	0.0828445	0.2621861	0.0173598	0.5243009	3.0947821	1.3395069	3.0016208	-9.151471e-01	2e-07	TRUE	2.17e-05	TRUE	FIGN	NM_018086 NP_060556 XM_005246661 XM_005246662 XP_005246718 XP_005246719	overlaps 3'	overlaps 3'	124197	inside exon	0	3	3	overlaps 3'UTR		128395	125375	0	TRUE
247	chr4	94749946	94751838	1893		53.797509	101838.69	4434747	4436639	1891	1893	0.0098274	0.0001757	0.0002082	0.0014504	0.0000186	0.5975308	0.0219699	0.2447260	3.0450941	-3.2421477	11.7314709	6.966059e+00	2e-07	TRUE	2.17e-05	TRUE	ATOH1	NM_005172 NP_005163	covers	covers	0	NA	NA	NA	1	NA		1064	1064	0	TRUE
248	chr6	28120834	28127230	6397		15.918833	101832.77	1447596	1453992	653	11137	0.3321883	0.5706250	0.1395359	0.5501235	0.1563082	0.6205281	0.2989133	-2.0319065	-0.0527876	-1.8681499	0.1209536	-9.328158e-01	2e-07	TRUE	2.17e-05	TRUE	ZKSCAN8	NM_001278119 NM_001278121 NM_001278122 NM_006298 NP_001265048 NP_001265050 NP_001265051 NP_006289 XM_005249382 XM_005249383 XP_005249439 XP_005249440	inside exon	inside	10845	inside exon	0	7	7	overlaps 3'UTR		17261	2170	0	TRUE
249	chr7	50467616	50472742	5127		19.840124	101720.31	2830866	2835992	1238	5127	0.0357947	0.0152165	0.0173752	0.1891223	0.0249483	0.0358990	0.0136991	0.1913968	3.6356115	0.7133045	1.2383085	-1.515559e-01	2e-07	TRUE	2.17e-05	TRUE	IKZF1	NM_001220765 NM_001220766 NM_001220767 NM_001220768 NM_001220769 NM_001220770 NM_001220771 NM_001220772 NM_001220773 NM_001220774 NM_001220775 NM_001220776 NM_006060 NP_001207694 NP_001207695 NP_001207696 NP_001207697 NP_001207698 NP_001207699 NP_001207700 NP_001207701 NP_001207702 NP_001207703 NP_001207704 NP_001207705 NP_006051	inside exon	inside	100382	inside exon	0	2	2	overlaps 3'UTR		105564	101041	0	TRUE
250	chr19	52615078	52620277	5200		19.556943	101696.11	7309014	7314213	2322	8695	0.1863217	0.3680702	0.0598819	0.3123168	0.0604445	0.2738923	0.0899536	-2.6197885	-0.2369705	-2.6062978	-0.4263720	-2.032728e+00	2e-07	TRUE	2.17e-05	TRUE	ZNF616	NM_178523 NP_848618 XM_005259375 XP_005259432	NA	NA	0	NA	NA	NA	5	NA		0	0	0	TRUE
251	chr11	113145986	113150998	5013		20.284584	101686.62	7112163	7117175	2679	20493	6.8466544	12.7166516	3.1341643	10.2032898	2.6580813	8.8908424	2.6900816	-2.0205661	-0.3176845	-2.2582617	-0.5163268	-2.240997e+00	2e-07	TRUE	2.17e-05	TRUE	NCAM1	NM_000615 NM_001076682 NM_001242607 NM_001242608 NM_181351 NP_000606 NP_001070150 NP_001229536 NP_001229537 NP_851996	overlaps 3'	overlaps 3'	2244	overlaps exon upstream	0	2	2	overlaps 3'UTR		5416	1799	0	TRUE
252	chr9	112137760	112141915	4156		24.440163	101573.32	4225755	4229910	1892	16085	0.2924046	0.0401990	0.2736353	0.1712571	1.1048450	0.0889348	0.1644104	2.7670216	2.0909304	4.7805390	1.1455863	2.032068e+00	2e-07	TRUE	2.17e-05	TRUE	PTPN3	NM_001145368 NM_001145369 NM_001145370 NM_001145371 NM_001145372 NM_002829 NP_001138840 NP_001138841 NP_001138842 NP_001138843 NP_001138844 NP_002820 NR_026918 XM_006717197 XM_006717198 XM_006717199 XM_006717200 XM_006717201 XM_006717202 XM_006717203 XM_006717204 XM_006717205 XM_006717206 XM_006717207 XP_006717260 XP_006717261 XP_006717262 XP_006717263 XP_006717264 XP_006717265 XP_006717266 XP_006717267 XP_006717268 XP_006717269 XP_006717270	overlaps 3'	overlaps 3'	118678	overlaps exon upstream	0	24	24	overlaps 3'UTR		122619	77657	0	TRUE
253	chr5	141971743	141975052	3310		30.669281	101515.32	6512018	6515327	2777	3310	1.8007159	0.1864395	2.5665522	0.4063449	4.4286673	0.4579737	2.1946468	3.7830522	1.1239973	4.5700933	1.2965572	3.557209e+00	2e-07	TRUE	2.17e-05	TRUE	FGF1	NM_000800 NM_001144892 NM_001144934 NM_001144935 NM_001257205 NM_001257206 NM_001257207 NM_001257208 NM_001257209 NM_001257210 NM_001257211 NM_001257212 NM_033136 NM_033137 NP_000791 NP_001138364 NP_001138406 NP_001138407 NP_001244134 NP_001244135 NP_001244136 NP_001244137 NP_001244138 NP_001244139 NP_001244140 NP_001244141 NP_149127 NP_149128 XM_005268390 XM_006714762 XP_005268447 XP_006714825	overlaps exon upstream	inside	102583	overlaps exon upstream	0	3	3	overlaps 3'UTR		105892	18656	0	TRUE
254	chr16	49365565	49370143	4579		22.155634	101450.65	3520567	3525145	1159	80903	0.0166014	0.0024364	0.0021360	0.0033022	0.0017919	0.1523664	0.2835756	-0.1898527	0.4386482	-0.4432359	5.9666393	6.862828e+00	2e-07	TRUE	2.17e-05	TRUE	C16orf78	NM_144602 NP_653203	upstream	upstream	37665	NA	NA	NA	5	NA		25511	25338	0	TRUE
255	chr1	202116170	202117827	1658		61.186066	101446.50	12731962	12733619	5037	17104	0.0290166	0.0056531	0.0065082	0.0107056	0.1749952	0.0142099	0.0083913	0.2032117	0.9212437	4.9521281	1.3297802	5.698594e-01	2e-07	TRUE	2.17e-05	TRUE	PTPN7	NM_001199797 NM_002832 NM_080588 NM_080589 NP_001186726 NP_002823 NP_542155 NR_037663 NR_037664 XR_426791	NA	NA	0	NA	NA	NA	8	NA		0	0	0	TRUE
256	chr11	7488023	7492611	4589		22.084063	101343.77	737202	741790	216	7175	0.1923562	0.0582437	0.1439698	0.1992929	0.3527905	0.2771310	1.0673360	1.3055932	1.7747174	2.5986384	2.2503951	4.195769e+00	2e-07	TRUE	2.17e-05	TRUE	SYT9	NM_175733 NP_783860 XM_005252795 XM_006718147 XP_005252852 XP_006718210	NA	NA	0	NA	NA	NA	6	NA		0	0	0	TRUE
257	chr18	74724756	74729226	4471		22.665649	101338.12	3189759	3194229	1464	38445	5.8786710	0.2234420	9.4229562	0.3511763	14.0441116	0.3875413	4.3379328	5.3982077	0.6522951	5.9739214	0.7944499	4.279036e+00	2e-07	TRUE	2.17e-05	TRUE	MBP	NM_001025081 NM_001025090 NM_001025092 NM_001025094 NM_001025098 NM_001025100 NM_001025101 NM_002385 NP_001020252 NP_001020261 NP_001020263 NP_001020271 NP_001020272 NP_002376 XM_005266699 XP_005266756 XR_245459 XR_245460 XR_245461 XR_430073 XR_430074	overlaps exon upstream	inside	115548	overlaps exon upstream	0	4	4	overlaps 3'UTR		120035	88447	0	TRUE
258	chr2	16085149	16087127	1979		50.836632	100605.69	826291	828269	372	8418	1.1761390	2.8726354	0.1444456	1.7608536	0.1429616	1.4522168	0.0959595	-4.3137766	-0.7060999	-4.3286749	-0.9841180	-4.903806e+00	2e-07	TRUE	2.17e-05	TRUE	MYCN	NM_005378 NP_005369 XM_006711886 XP_006711949	overlaps exon upstream	inside	3103	overlaps exon upstream	0	2	2	overlaps 3'UTR		5083	4032	0	TRUE
259	chr11	121959811	121962922	3112		32.295376	100503.21	7900711	7903822	2967	12874	2.2286665	4.5049654	0.7284272	3.8681394	0.7529081	1.7037766	0.3398425	-2.6286594	-0.2198763	-2.5809703	-1.4027798	-3.728578e+00	2e-07	TRUE	2.17e-05	TRUE	MIR100HG	NR_024430	NA	NA	0	NA	NA	NA	4	NA		0	0	0	TRUE
260	chr6	114180856	114184654	3799		26.285927	99860.24	6176033	6179831	2377	9487	8.7444993	14.3475537	3.3438642	19.3097815	3.0729679	21.0083330	5.6284581	-2.1012166	0.4285271	-2.2231002	0.5501569	-1.349993e+00	2e-07	TRUE	2.17e-05	TRUE	MARCKS	NM_002356 NP_002347	overlaps 3'	overlaps 3'	2329	overlaps exon upstream	0	2	2	overlaps 3'UTR		6125	2833	0	TRUE
261	chr2	158175133	158178307	3175		31.424312	99772.19	7969514	7972688	3428	28133	2.5211679	0.0695881	4.0489397	0.0172178	6.2656501	0.0159640	1.6125771	5.8625599	-2.0149356	6.4924800	-2.1240178	4.534384e+00	2e-07	TRUE	2.17e-05	TRUE	ERMN	NM_001009959 NM_020711 NP_001009959 NP_065762	overlaps exon upstream	inside	5839	overlaps exon upstream	0	4	4	overlaps 3'UTR		9021	6208	0	TRUE
262	chr16	25247338	25252060	4723		21.101725	99663.45	2521626	2526348	858	4723	0.3188662	0.6071565	0.1051035	0.5977446	0.1083568	0.5208617	0.1074470	-2.5302576	-0.0225393	-2.4862790	-0.2211680	-2.498443e+00	2e-07	TRUE	2.17e-05	TRUE	ZKSCAN2	NM_001012981 NP_001012999	overlaps exon upstream	inside	16795	overlaps exon upstream	0	7	7	overlaps 3'UTR		21533	13184	0	TRUE
263	chr10	82277654	82282309	4656		21.401816	99646.85	4004544	4009199	1798	30853	1.7138601	3.2159706	0.8744616	2.0330000	0.8401722	1.7031492	0.5186254	-1.8787873	-0.6616440	-1.9364973	-0.9170494	-2.632489e+00	2e-07	TRUE	2.17e-05	TRUE	TSPAN14	NM_001128309 NM_030927 NP_001121781 NP_112189 XM_005270191 XM_005270192 XM_006717990 XM_006717991 XM_006717992 XP_005270248 XP_005270249 XP_006718053 XP_006718054 XP_006718055	overlaps exon upstream	inside	63616	overlaps exon upstream	0	6	6	overlaps 3'UTR		68353	28742	0	TRUE
264	chr2	8869342	8872119	2778		35.855562	99606.75	456163	458940	173	15820	6.7176140	13.9777680	2.0696993	10.1427266	1.8968673	8.7632490	2.9219908	-2.7556409	-0.4626885	-2.8814433	-0.6735962	-2.258110e+00	2e-07	TRUE	2.17e-05	TRUE	KIDINS220	NM_020738 NP_065789	overlaps exon upstream	inside	105636	overlaps exon upstream	0	29	29	overlaps 3'UTR		108768	88055	0	TRUE
265	chr10	112836610	112840648	4039		24.605027	99379.71	5988883	5992921	2627	5965	1.2115255	3.1827145	0.2899255	0.6951313	0.1396684	0.5351105	0.2538652	-3.4565037	-2.1949002	-4.5101803	-2.5723489	-3.648123e+00	2e-07	TRUE	2.17e-05	TRUE	ADRA2A	NM_000681 NP_000672	overlaps 5'	overlaps 5'	0	inside exon	0	1	1	overlaps 3'UTR		3872	1397	0	TRUE
266	chr18	74694866	74702116	7251		13.686667	99242.02	3163272	3170522	1464	38445	4.8181287	0.1632310	7.7829283	0.0606830	11.5896734	0.0311244	3.5535147	5.5753258	-1.4275519	6.1497808	-2.3907985	4.444259e+00	2e-07	TRUE	2.17e-05	TRUE	MBP	NM_001025081 NM_001025090 NM_001025092 NM_001025094 NM_001025098 NM_001025100 NM_001025101 NM_002385 NP_001020252 NP_001020261 NP_001020263 NP_001020271 NP_001020272 NP_002376 XM_005266699 XP_005266756 XR_245459 XR_245460 XR_245461 XR_430073 XR_430074	covers exon(s)	inside	27108	covers exon(s)	0	4	4	overlaps 3'UTR		38433	28918	0	TRUE
267	chr10	73818790	73822666	3877		25.548257	99050.59	3383159	3387035	1530	30034	5.4077975	1.3974088	6.2434909	4.2966950	8.5465576	10.3236361	18.0580143	2.1595988	1.6204732	2.6125893	2.8851251	3.691813e+00	2e-07	TRUE	2.17e-05	TRUE	SPOCK2	NM_001134434 NM_001244950 NM_014767 NP_001127906 NP_001231879 NP_055582 XM_005270302 XP_005270359	overlaps 3'	overlaps 3'	26124	overlaps exon upstream	0	12	12	overlaps 3'UTR		29998	25568	0	TRUE
268	chr20	37546797	37551665	4869		20.316833	98922.66	2547598	2552466	1019	4869	1.6748901	0.5454675	2.6514545	0.4095576	2.2328135	0.6160822	2.5464336	2.2812188	-0.4134270	2.0332976	0.1756296	2.222913e+00	2e-07	TRUE	2.17e-05	TRUE	PPP1R16B	NM_001172735 NM_015568 NP_001166206 NP_056383	overlaps exon upstream	inside	112449	overlaps exon upstream	0	10	10	overlaps 3'UTR		117319	82740	0	TRUE
269	chr6	41065092	41070141	5050		19.586902	98913.86	2949242	2954291	1068	18090	0.8837190	1.8426697	0.2770544	1.2725896	0.2988893	0.6977443	0.4638731	-2.7335563	-0.5340302	-2.6241144	-1.4010272	-1.989996e+00	2e-07	TRUE	2.17e-05	TRUE	NFYA	NM_002505 NM_021705 NP_002496 NP_068351	overlaps exon upstream	inside	18324	overlaps exon upstream	0	9	9	overlaps 3'UTR		23378	18320	0	TRUE
270	chr9	117072825	117074793	1969		50.191229	98826.53	4627243	4629211	2074	12444	0.2344081	0.0373868	0.0751565	0.0803198	0.0896958	0.5118262	3.8374524	1.0073677	1.1032242	1.2625101	3.7750512	6.681474e+00	2e-07	TRUE	2.17e-05	TRUE	COL27A1	NM_032888 NP_116277 XM_006717308 XM_006717309 XM_006717310 XP_006717371 XP_006717372 XP_006717373 XR_428542	overlaps 3'	overlaps 3'	3134	overlaps exon upstream	0	3	3	inside transcription region		3284	3078	0	TRUE
271	chr5	178508469	178513269	4801		20.562168	98718.97	8684130	8688930	3671	9824	0.6955424	1.2128694	0.3279463	1.0657201	0.3308132	0.9594855	0.4786696	-1.8868929	-0.1865956	-1.8743356	-0.3380913	-1.341322e+00	2e-07	TRUE	2.17e-05	TRUE	ZNF354C	NM_014594 NP_055409 XM_005265894 XP_005265951	downstream	downstream	20862	NA	NA	NA	5	NA		20084	18028	0	TRUE
272	chr22	39526787	39530101	3315		29.770874	98690.45	2415841	2419155	863	14413	1.6620482	0.1986347	2.8008367	0.2091824	2.1550670	0.2574613	4.2127310	3.8176683	0.0746437	3.4395431	0.3742380	4.406566e+00	2e-07	TRUE	2.17e-05	TRUE	CBX7	NM_175709 NP_783640 XM_005261413 XM_006724174 XM_006724175 XM_006724176 XM_006724177 XM_006724178 XP_005261470 XP_006724237 XP_006724238 XP_006724239 XP_006724240 XP_006724241	overlaps exon upstream	inside	18437	overlaps exon upstream	0	6	6	overlaps 3'UTR		21759	18553	0	TRUE
273	chr2	200321774	200326144	4371		22.574308	98672.30	9990441	9994811	4401	15932	1.4943471	4.3079300	0.2585596	0.4194142	0.0655812	0.2239684	0.0091657	-4.0584260	-3.3605472	-6.0375693	-4.2656280	-8.876532e+00	2e-07	TRUE	2.17e-05	TRUE	SATB2	NM_001172509 NM_001172517 NM_015265 NP_001165980 NP_001165988 NP_056080 XM_005246396 XM_006712372 XP_005246453 XP_006712435	covers exon(s)	inside	9845	covers exon(s)	0	2	12	5' UTR		201766	183826	0	TRUE
274	chr2	6122430	6131157	8728		11.297049	98600.64	320162	328889	131	34914	0.1154847	0.1851048	0.0362434	0.2735568	0.0957982	0.1412639	0.0106637	-2.3525500	0.5634982	-0.9502713	-0.3899491	-4.117561e+00	2e-07	TRUE	2.17e-05	TRUE	LOC400940	NM_207479 NR_026833	NA	NA	0	NA	NA	NA	3	NA		0	0	0	TRUE
275	chr5	108527476	108532299	4824		20.409103	98453.52	4381222	4386045	1971	10399	0.3846136	0.6847865	0.1614748	0.6411349	0.1691929	0.6823552	0.2112720	-2.0843455	-0.0950263	-2.0169855	-0.0051314	-1.696553e+00	2e-07	TRUE	2.17e-05	TRUE	FER	NM_005246 NP_005237 XM_005271923 XM_006714572 XM_006714573 XP_005271980 XP_006714635 XP_006714636 XR_427709	downstream	downstream	443953	NA	NA	NA	20	NA		439850	389392	0	TRUE
276	chr12	5020003	5027419	7417		13.272540	98442.43	444319	451735	170	9704	0.3944235	0.0289056	0.6032493	0.1151193	0.4759227	0.2346848	1.5866419	4.3833346	1.9937096	4.0413077	3.0213047	5.778485e+00	2e-07	TRUE	2.17e-05	TRUE	KCNA1	NM_000217 NP_000208	overlaps exon upstream	inside	930	overlaps exon upstream	0	2	2	overlaps 3'UTR		8349	1487	0	TRUE
277	chr9	109686413	109692040	5628		17.433453	98115.48	4102288	4107915	1838	12274	0.4203947	0.9273913	0.0937338	0.5944776	0.1331888	0.4896469	0.2064537	-3.3065371	-0.6415557	-2.7997058	-0.9214364	-2.167360e+00	2e-07	TRUE	2.17e-05	TRUE	ZNF462	NM_021224 NP_067047 XM_006717209 XM_006717210 XM_006717211 XM_006717212 XM_006717213 XM_006717214 XM_006717215 XM_006717216 XM_006717217 XM_006717218 XP_006717272 XP_006717273 XP_006717274 XP_006717275 XP_006717276 XP_006717277 XP_006717278 XP_006717279 XP_006717280 XP_006717281	overlaps 5'	overlaps 5'	0	inside exon	0	1	11	overlaps 5' UTR		87382	86661	0	TRUE
278	chr11	26681803	26684912	3110		31.510454	97997.51	1752524	1755633	689	8264	0.5536523	0.0492803	0.6463817	0.0365785	2.1137133	0.0082701	0.0111736	3.7133041	-0.4300159	5.4226256	-2.5750343	-2.140912e+00	2e-07	TRUE	2.17e-05	TRUE	ANO3	NM_031418 NP_113606	overlaps 3'	overlaps 3'	186266	overlaps exon upstream	0	24	24	overlaps 3'UTR		189299	152334	0	TRUE
279	chr6	31866881	31869454	2574		38.012601	97844.43	2003118	2005691	777	6023	0.7261791	1.5795521	0.1106338	1.4342025	0.1163962	1.2703996	0.2046696	-3.8356520	-0.1392668	-3.7623993	-0.3142332	-2.948147e+00	2e-07	TRUE	2.17e-05	TRUE	C2	NM_000063 NM_001145903 NM_001178063 NM_001282457 NM_001282458 NM_001282459 NP_000054 NP_001139375 NP_001171534 NP_001269386 NP_001269387 NP_001269388	overlaps 5'	overlaps 5'	0	overlaps exon downstream	0	1	14	overlaps 5' UTR		44673	44290	0	TRUE
280	chr22	38201287	38203437	2151		45.480044	97827.57	2162832	2164982	789	19975	7.3166273	13.3971597	2.1527035	15.4720127	1.9318815	11.4639457	6.2758998	-2.6377056	0.2077337	-2.7938486	-0.2248235	-1.094033e+00	2e-07	TRUE	2.17e-05	TRUE	H1F0	NM_005318 NP_005309	inside exon	inside	173	inside exon	0	1	1	overlaps 3'UTR		2329	584	0	TRUE
281	chr11	92623653	92629616	5964		16.394203	97775.03	6160357	6166320	2230	9481	0.6549733	1.2438608	0.2675280	1.0499733	0.3244896	0.4370746	0.1019343	-2.2170630	-0.2444724	-1.9385807	-1.5088736	-3.609113e+00	2e-07	TRUE	2.17e-05	TRUE	FAT3	NM_001008781 NP_001008781 XM_006718764 XP_006718827	overlaps exon upstream	inside	49925	overlaps exon upstream	0	11	11	overlaps 3'UTR		55907	47065	0	TRUE
282	chr7	31376680	31378939	2260		43.160562	97542.87	1821363	1823622	816	4184	8.6045773	23.8357293	1.3977297	4.9757516	0.8683057	1.0400070	0.2312986	-4.0919685	-2.2601394	-4.7787790	-4.5184607	-6.687226e+00	2e-07	TRUE	2.17e-05	TRUE	NEUROD6	NM_022728 NP_073565	overlaps 3'	overlaps 3'	1599	overlaps exon upstream	0	2	2	overlaps 5' UTR		3463	1013	0	TRUE
283	chr8	92967205	92972749	5545		17.520440	97150.84	4534304	4539848	1795	5545	0.8777238	1.7338381	0.2641520	1.6079670	0.1825935	0.7353023	0.7533904	-2.7145291	-0.1087314	-3.2472617	-1.2375597	-1.202500e+00	2e-07	TRUE	2.17e-05	TRUE	RUNX1T1	NM_001198625 NM_001198626 NM_001198627 NM_001198628 NM_001198629 NM_001198630 NM_001198631 NM_001198632 NM_001198633 NM_001198634 NM_001198679 NM_004349 NM_175634 NM_175635 NM_175636 NP_001185554 NP_001185555 NP_001185556 NP_001185557 NP_001185558 NP_001185559 NP_001185560 NP_001185561 NP_001185562 NP_001185563 NP_001185608 NP_004340 NP_783552 NP_783553 NP_783554 XM_006716676 XP_006716739	overlaps exon upstream	inside	142705	overlaps exon upstream	0	12	12	overlaps 3'UTR		148259	115810	0	TRUE
284	chr17	48187315	48191675	4361		22.179656	96725.48	4919187	4923547	1783	14888	1.3033076	1.6173952	0.8779203	1.6054235	0.9485837	1.5645792	3.2146433	-0.8815103	-0.0107183	-0.7698253	-0.0478975	9.909865e-01	2e-07	TRUE	2.17e-05	TRUE	PDK2	NM_001199898 NM_001199899 NM_001199900 NM_002611 NP_001186827 NP_001186828 NP_001186829 NP_002602	overlaps 3'	overlaps 3'	14256	overlaps exon upstream	0	11	11	overlaps 3'UTR		15674	12600	0	TRUE
285	chr1	151772615	151775193	2579		37.497993	96707.33	9587975	9590553	3849	17254	0.0327625	0.0006434	0.0039433	0.0016970	0.0071685	0.0027669	0.6920209	2.6156035	1.3992249	3.4778829	2.1044503	1.007088e+01	2e-07	TRUE	2.17e-05	TRUE	LINGO4	NM_001004432 NP_001004432	overlaps 3'	overlaps 3'	2689	inside exon	0	2	2	overlaps 5' UTR		5117	1781	0	TRUE
286	chrX	54219461	54224390	4930		19.616007	96706.91	2090310	2095239	948	5810	0.2872380	0.5496455	0.0938923	0.5482810	0.0902331	0.4675671	0.0836666	-2.5494226	-0.0035859	-2.6067726	-0.2333280	-2.715778e+00	2e-07	TRUE	2.17e-05	TRUE	WNK3	NM_001002838 NM_020922 NP_001002838 NP_065973 XM_006724593 XM_006724594 XP_006724656 XP_006724657	inside exon	inside	160048	inside exon	0	23	23	3'UTR		165182	135349	0	TRUE
287	chr15	74005268	74006854	1587		60.721459	96364.96	3625650	3627236	1666	6180	0.9951950	1.8061186	0.3092045	2.1346146	0.3218556	2.2424494	0.3380154	-2.5462595	0.2410830	-2.4884071	0.3121828	-2.417732e+00	2e-07	TRUE	2.17e-05	TRUE	CD276	NM_001024736 NM_025240 NP_001019907 NP_079516 XM_005254699 XM_005254700 XP_005254756 XP_005254757	overlaps exon upstream	inside	28646	overlaps exon upstream	0	10	10	overlaps 3'UTR		30237	13279	0	TRUE
288	chr9	116810931	116817222	6292		15.239042	95884.05	4579217	4585508	2059	8697	0.1866021	0.3099808	0.0379554	0.4709682	0.0556588	0.6600272	0.2162379	-3.0298005	0.6034508	-2.4774960	1.0903467	-5.195593e-01	2e-07	TRUE	2.17e-05	TRUE	ZNF618	NM_001040063 NM_133374 NP_588615 XM_005251692 XM_005251693 XM_005251694 XM_005251695 XM_005251696 XM_005251697 XM_005251698 XM_005251699 XP_005251749 XP_005251750 XP_005251751 XP_005251752 XP_005251753 XP_005251754 XP_005251755 XP_005251756	inside exon	inside	20730	inside exon	0	6	6	overlaps 3'UTR		28674	13805	0	TRUE
289	chr14	89622547	89627266	4720		20.312798	95876.41	4087728	4092447	1623	6773	0.9193631	1.2608169	0.4671044	1.3292488	0.4382088	1.3982848	2.9319192	-1.4325420	0.0762524	-1.5246684	0.1492995	1.217487e+00	2e-07	TRUE	2.17e-05	TRUE	FOXN3	NM_001085471 NM_005197 NP_001078940 NP_005188	inside exon	inside	458228	inside exon	0	6	6	3'UTR		462978	250062	0	TRUE
290	chr13	46351394	46357391	5998		15.941144	95614.98	1556563	1562560	728	10952	0.3609782	0.8129479	0.0894860	0.3604781	0.0698885	0.9324070	0.3041122	-3.1834293	-1.1732514	-3.5400358	0.1977970	-1.418559e+00	2e-07	TRUE	2.17e-05	TRUE	SIAH3	NM_198849 NP_942146	overlaps 3'	overlaps 3'	68455	inside exon	0	2	2	3'UTR		71430	68246	0	TRUE
291	chr16	49370199	49372910	2712		34.927684	94723.88	3525146	3527857	1159	80903	0.0374130	0.0051495	0.0058977	0.0104211	0.0058589	0.3356058	0.6213618	0.1957191	1.0169947	0.1861955	6.0261859	6.914852e+00	2e-07	TRUE	2.17e-05	TRUE	C16orf78	NM_144602 NP_653203	upstream	upstream	34898	NA	NA	NA	5	NA		25511	25338	0	TRUE
292	chr15	37181406	37184666	3261		29.009548	94600.14	898107	901367	426	11786	1.2404440	2.0970949	0.3140510	3.5924255	0.5893103	0.2759070	0.1886732	-2.7393214	0.7765661	-1.8312929	-2.9261380	-3.474431e+00	2e-07	TRUE	2.17e-05	TRUE	MEIS2	NM_001220482 NM_002399 NM_020149 NM_170674 NM_170675 NM_170676 NM_170677 NM_172315 NM_172316 NP_001207411 NP_002390 NP_733774 NP_733775 NP_733776 NP_733777 NP_758526 NP_758527 NR_051953 XM_006720522 XM_006720523 XM_006720524 XM_006720525 XM_006720526 XM_006720527 XM_006720528 XM_006720529 XP_006720585 XP_006720586 XP_006720587 XP_006720588 XP_006720589 XP_006720590 XP_006720591 XP_006720592	overlaps 3'	overlaps 3'	208834	overlaps exon upstream	0	13	13	3'UTR		210278	203418	0	TRUE
293	chr4	94693224	94696064	2841		33.224629	94391.17	4423508	4426348	1887	8244	0.2018343	0.1108580	0.0825457	0.1809183	0.1246912	1.9172620	1.6664049	-0.4254487	0.7066248	0.1696467	4.1122623	3.909954e+00	2e-07	TRUE	2.17e-05	TRUE	GRID2	NM_001286838 NM_001510 NP_001273767 NP_001501 XM_006714195 XP_006714258	overlaps 3'	overlaps 3'	1467674	overlaps exon upstream	0	15	15	inside transcription region		1468099	1467841	0	TRUE
294	chr10	91596887	91600612	3726		25.330037	94379.72	4485230	4488955	1967	3745	0.3394577	0.7461085	0.0891703	0.5265114	0.0884453	0.3429200	0.0252681	-3.0647506	-0.5029207	-3.0765280	-1.1215133	-4.883995e+00	2e-07	TRUE	2.17e-05	TRUE	LINC00865	NR_038382	NA	NA	0	NA	NA	NA	3	NA		0	0	0	TRUE
295	chr21	48073863	48079952	6090		15.494966	94364.34	2026453	2032542	784	20214	0.5135305	0.8724771	0.2547229	0.8009952	0.2650819	0.7643179	0.2865504	-1.7761888	-0.1233238	-1.7186789	-0.1909446	-1.606328e+00	2e-07	TRUE	2.17e-05	TRUE	PRMT2	NM_001242864 NM_001242865 NM_001242866 NM_001286676 NM_001286677 NM_001286678 NM_001535 NM_206962 NP_001229793 NP_001229794 NP_001229795 NP_001273605 NP_001273606 NP_001273607 NP_001526 NP_996845 XM_005261111 XM_006723998 XM_006723999 XM_006724000 XP_005261168 XP_006724061 XP_006724062 XP_006724063	covers exon(s)	inside	10665	covers exon(s)	0	6	6	inside transcription region		18650	12504	0	TRUE
296	chr12	124410816	124420207	9392		10.046743	94359.01	7880675	7890066	3215	27692	0.3200212	0.5954790	0.1336829	0.4752875	0.1447076	0.4527703	0.1648502	-2.1552353	-0.3252501	-2.0409102	-0.3952713	-1.852895e+00	2e-07	TRUE	2.17e-05	TRUE	DNAH10	NM_207437 NP_997320 XM_005253555 XP_005253612	covers exon(s)	inside	1219	covers exon(s)	0	11	11	overlaps 3'UTR		10670	5076	0	TRUE
297	chr10	21068907	21074854	5948		15.849057	94270.19	1187424	1193371	531	7334	1.0449654	0.3145190	1.4229781	0.4601376	1.4728733	0.5680699	3.0982659	2.1776944	0.5489183	2.2274143	0.8529214	3.300242e+00	2e-07	TRUE	2.17e-05	TRUE	NEBL	NM_001173484 NM_006393 NM_016365 NM_213569 NP_001166955 NP_006384 NP_998734 XM_005252342 XM_005252343 XM_005252344 XP_005252399 XP_005252400 XP_005252401 XR_242691	overlaps exon upstream	inside	388262	overlaps exon upstream	0	7	7	overlaps 3'UTR		394213	387950	0	TRUE
298	chr12	31144786	31149533	4748		19.759993	93820.45	1922250	1926997	769	4748	0.2611842	0.2300603	0.0960350	0.7318608	0.1774591	1.3430163	0.7542591	-1.2603793	1.6695574	-0.3745251	2.5453931	1.713048e+00	2e-07	TRUE	2.17e-05	TRUE	TSPAN11	NM_001080509 NP_001073978	overlaps exon upstream	inside	64948	overlaps exon upstream	0	7	7	overlaps 3'UTR		69699	64964	0	TRUE
299	chr17	40125490	40130650	5161		18.178437	93818.91	3813010	3818170	1425	13640	4.4313960	1.5240415	6.1739706	1.7243179	8.8361899	1.6279481	3.4062504	2.0182965	0.1781236	2.5355223	0.0951525	1.160282e+00	2e-07	TRUE	2.17e-05	TRUE	DNAJC7	NM_001144766 NM_003315 NP_001138238 NP_003306 NR_029431 XM_006722050 XM_006722051 XM_006722052 XM_006722053 XM_006722054 XP_006722113 XP_006722114 XP_006722115 XP_006722116 XP_006722117	overlaps 3'	overlaps 3'	39065	covers exon(s)	0	14	14	overlaps 3'UTR		41276	18190	0	TRUE
300	chr1	62627024	62629585	2562		36.602436	93775.44	5710456	5713017	2210	23107	0.1895289	0.0711856	0.0665261	0.1968017	0.1973814	0.1530774	2.1414840	-0.0976659	1.4670853	1.4713292	1.1046041	4.910882e+00	2e-07	TRUE	2.17e-05	TRUE	INADL	NM_005799 NM_176877 NM_176878 NP_795352 XM_005270341 XM_005270343 XM_005270345 XM_005270347 XM_006710275 XM_006710276 XM_006710277 XM_006710278 XP_005270398 XP_005270400 XP_005270402 XP_005270404 XP_006710338 XP_006710339 XP_006710340 XP_006710341	inside intron	inside	209098	inside intron	-12962	16	17	inside transcription region		226421	226084	0	TRUE
301	chr13	50589294	50592604	3311		28.248482	93530.72	1828845	1832155	872	8898	0.8661745	1.8029862	0.1981200	1.5774843	0.1986438	1.2880481	0.4360790	-3.1859421	-0.1927627	-3.1821328	-0.4852019	-2.047727e+00	2e-07	TRUE	2.17e-05	TRUE	DLEU2	NR_002612	NA	NA	0	NA	NA	NA	14	NA		0	0	0	TRUE
302	chr19	46437072	46442747	5676		16.468724	93476.48	6255572	6261247	1999	8141	1.7787584	3.0362643	1.0150224	2.4903478	0.8499952	2.3605235	0.6642390	-1.5807858	-0.2859501	-1.8367708	-0.3631906	-2.192523e+00	2e-07	TRUE	2.17e-05	TRUE	NOVA2	NM_002516 NP_002507 XM_006723229 XM_006723230 XP_006723292 XP_006723293	downstream	downstream	33910	NA	NA	NA	4	NA		33886	33488	0	TRUE
303	chr3	147106760	147109487	2728		34.242761	93414.25	7933751	7936478	3297	52751	0.0576369	0.0073986	0.0055639	0.0759468	0.0275265	0.5373220	0.7848528	-0.4111729	3.3596610	1.8954905	6.1823862	6.729022e+00	2e-07	TRUE	2.17e-05	TRUE	ZIC4	NM_001168378 NM_001168379 NM_001243256 NM_032153 NP_001161850 NP_001161851 NP_001230185 NP_115529 NR_033118 NR_033119 NR_040762	covers exon(s)	inside	15109	covers exon(s)	0	4	4	inside transcription region		20761	13938	0	TRUE
304	chr17	72848794	72852601	3808		24.520210	93372.96	6656092	6659899	2493	24769	0.0560686	0.0076417	0.0346593	0.0063863	0.0332277	0.0326039	0.7991305	2.1812834	-0.2588962	2.1204289	2.0930859	6.708400e+00	2e-07	TRUE	2.17e-05	TRUE	GRIN2C	NM_000835 NM_001278553 NP_000826 NP_001265482 NR_103735 XM_006721845 XM_006721846 XM_006721847 XM_006721848 XP_006721908 XP_006721909 XP_006721910 XP_006721911	overlaps exon upstream	inside	4365	overlaps exon upstream	0	2	2	overlaps 5' UTR		10271	515	0	TRUE
305	chr22	28377279	28379844	2566		36.301350	93149.26	1258744	1261309	421	9937	0.7751015	1.9081137	0.1146750	1.0569859	0.1152789	0.5800340	0.0891731	-4.0565248	-0.8521910	-4.0489461	-1.7179378	-4.419395e+00	2e-07	TRUE	2.17e-05	TRUE	TTC28-AS1	NR_026962 NR_026963	NA	NA	0	NA	NA	NA	5	NA		0	0	0	TRUE
306	chr7	138269486	138273870	4385		21.235951	93119.65	7361301	7365685	3175	25704	0.3945716	0.7406422	0.1290976	0.7508796	0.1527003	0.6091696	0.1462718	-2.5203145	0.0198048	-2.2780743	-0.2819329	-2.340125e+00	2e-07	TRUE	2.17e-05	TRUE	TRIM24	NM_003852 NM_015905 NP_003843 NP_056989	overlaps 3'	overlaps 3'	124407	overlaps exon upstream	0	19	19	overlaps 3'UTR		125253	124402	0	TRUE
307	chr15	99669569	99675798	6230		14.941463	93085.31	5466641	5472870	2454	14965	0.6199249	0.1926623	1.0209365	0.2023051	0.8637321	0.4055549	0.3493026	2.4057472	0.0704585	2.1645100	1.0738233	8.584034e-01	2e-07	TRUE	2.17e-05	TRUE	SYNM	NM_015286 NM_145728 NP_056101 NP_663780	NA	NA	0	NA	NA	NA	4	NA		0	0	0	TRUE
308	chr2	175200820	175205330	4511		20.543515	92671.80	8898548	8903058	3905	15139	0.1644606	0.1249093	0.0497383	0.9246308	0.0694901	0.0031697	0.0002758	-1.3284515	2.8879960	-0.8460013	-5.3003857	-8.822867e+00	2e-07	TRUE	2.17e-05	TRUE	SP9	NM_001145250 NP_001138722	overlaps 3'	overlaps 3'	999	overlaps exon upstream	0	2	2	inside transcription region		2447	2447	0	TRUE
309	chr6	21134685	21139212	4528		20.392213	92335.94	1004574	1009101	446	6518	0.2397813	0.6150319	0.1102574	0.0361309	0.0117244	0.0033948	0.0003417	-2.4797859	-4.0893556	-5.7130742	-7.5012121	-1.081379e+01	2e-07	TRUE	2.17e-05	TRUE	CDKAL1	NM_017774 NP_060244 XM_006715127 XM_006715128 XP_006715190 XP_006715191	inside intron	inside	69406	inside intron	-25991	2	3	inside transcription region		167355	165834	0	TRUE
310	chr7	66103843	66108029	4187		22.005256	92136.00	3384595	3388781	1445	4797	0.9881873	1.7117984	0.4668752	1.4964533	0.5182634	1.5079470	0.6007220	-1.8744040	-0.1939655	-1.7237553	-0.1829270	-1.510744e+00	2e-07	TRUE	2.17e-05	TRUE	RABGEF1	NM_001287060 NM_001287061 NM_001287062 NM_014504 NP_001273989 NP_001273990 NP_001273991 NP_055319 NR_104676	overlaps exon downstream	inside	9975	overlaps exon downstream	0	3	13	5' UTR		182580	25457	0	TRUE
311	chr10	25886698	25891163	4466		20.625556	92113.73	1440460	1444925	662	8712	0.7966956	0.0716035	1.2043636	0.1039149	1.1789262	0.1049408	3.0119492	4.0720972	0.5373006	4.0412997	0.5514742	5.394524e+00	2e-07	TRUE	2.17e-05	TRUE	GPR158	NM_020752 NP_065803	overlaps 3'	overlaps 3'	3556	overlaps exon upstream	0	3	3	overlaps 3'UTR		8015	4999	0	TRUE
312	chr1	35327019	35331902	4884		18.823413	91933.55	3501452	3506335	1227	16865	1.1559201	0.2433083	1.8324881	0.4533056	1.9268590	1.1109495	0.8718617	2.9129462	0.8976984	2.9853934	2.1909356	1.841314e+00	2e-07	TRUE	2.17e-05	TRUE	DLGAP3	NM_001080418 NP_001073887 XM_005271091 XP_005271148	overlaps 3'	overlaps 3'	39082	inside exon	0	10	10	overlaps 3'UTR		39947	39300	0	TRUE
313	chr1	45482075	45485819	3745		24.507226	91779.56	4654323	4658067	1659	20293	0.3961758	0.7730182	0.1066765	0.7041733	0.1183720	0.8289369	0.3015289	-2.8572595	-0.1345719	-2.7071741	0.1007598	-1.358206e+00	2e-07	TRUE	2.17e-05	TRUE	ZSWIM5	NM_020883 NP_065934	overlaps 3'	overlaps 3'	186431	overlaps two exons	0	14	14	overlaps 3'UTR		190174	187896	0	TRUE
314	chr4	1980363	1983917	3555		25.779021	91644.42	409341	412895	111	17043	0.5002758	0.8515495	0.1646355	1.1565679	0.1691977	1.1174438	0.2685693	-2.3708146	0.4416876	-2.3313808	0.3920400	-1.664796e+00	2e-07	TRUE	2.17e-05	TRUE	WHSC1	NM_001042424 NM_007331 NM_014919 NM_133330 NM_133331 NM_133332 NM_133333 NM_133334 NM_133335 NM_133336 NP_001035889 NP_015627 NP_579877 NP_579878 NP_579889 NP_579890 XM_005248001 XM_005248002 XM_005248005 XM_006713914 XM_006713915 XP_005248058 XP_005248059 XP_005248062 XP_006713977 XP_006713978	overlaps exon upstream	inside	26528	overlaps exon upstream	0	12	12	overlaps 3'UTR		30099	25766	0	TRUE
315	chr10	38343300	38348990	5691		16.044971	91311.93	1956452	1962142	921	5691	0.6058941	1.0721585	0.2645311	0.8898466	0.2500990	1.0576846	0.6346525	-2.0190092	-0.2688896	-2.0999472	-0.0196088	-7.564795e-01	2e-07	TRUE	2.17e-05	TRUE	ZNF33A	NM_001278170 NM_001278171 NM_001278173 NM_001278174 NM_001278175 NM_001278176 NM_001278177 NM_001278178 NM_001278179 NM_006954 NM_006974 NP_001265099 NP_001265100 NP_001265102 NP_001265103 NP_001265104 NP_001265105 NP_001265106 NP_001265107 NP_001265108 NP_008885 NP_008905	overlaps exon upstream	inside	37560	overlaps exon upstream	0	3	3	overlaps 3'UTR		43255	39698	0	TRUE
316	chr18	55027221	55036165	8945		10.202467	91261.07	2418016	2426960	1149	19133	0.9425818	0.1701119	1.4175802	0.7765543	1.4510877	0.8317772	1.0219584	3.0588743	2.1906026	3.0925787	2.2897130	2.586781e+00	2e-07	TRUE	2.17e-05	TRUE	ST8SIA3	NM_015879 NP_056963	overlaps 3'	overlaps 3'	7500	overlaps exon upstream	0	4	4	overlaps 3'UTR		16440	7430	0	TRUE
317	chr14	23778025	23780946	2922		31.137049	90982.46	322733	325654	99	5900	2.4253868	0.6040108	3.9821522	0.6249764	3.4067515	0.6223262	3.1971513	2.7209020	0.0492274	2.4957504	0.0430965	2.404141e+00	2e-07	TRUE	2.17e-05	TRUE	BCL2L2	NM_001199839 NM_004050 NP_001186768 NP_004041	inside exon	inside	1678	inside exon	0	3	3	overlaps 3'UTR		4621	1197	0	TRUE
318	chr6	39869589	39872640	3052		29.775261	90874.10	2887262	2890313	1053	29826	1.7533770	0.3295380	2.4938420	0.6485969	4.1490689	0.1966467	1.0870229	2.9198532	0.9768771	3.6542707	-0.7448390	1.721865e+00	2e-07	TRUE	2.17e-05	TRUE	MOCS1	NM_001075098 NM_005942 NM_005943 NM_138928 NP_001068566 NP_005934 NR_033233	overlaps 3'	overlaps 3'	29650	inside exon	0	9	9	3'UTR		30256	19445	0	TRUE
319	chr1	209958584	209961994	3411		26.639157	90866.16	13479308	13482718	5264	16257	0.0436059	0.0065902	0.0215554	0.0216520	0.0289957	0.1348984	0.5798335	1.7096525	1.7161027	2.1374433	4.3554055	6.459170e+00	2e-07	TRUE	2.17e-05	TRUE	IRF6	NM_001206696 NM_006147 NP_001193625 NP_006138	overlaps 3'	overlaps 3'	17526	overlaps exon upstream	0	7	7	overlaps 3'UTR		20552	8021	0	TRUE
320	chr19	50410087	50413144	3058		29.660255	90701.06	7009276	7012333	2212	6456	1.0963856	1.8739355	0.4853985	1.8198789	0.4776351	1.7013160	1.0477103	-1.9488299	-0.0422288	-1.9720904	-0.1394202	-8.388315e-01	2e-07	TRUE	2.17e-05	TRUE	IL4I1	NM_001258017 NM_001258018 NM_152899 NM_172374 NP_001244946 NP_001244947 NP_690863 NP_758962 NR_047577	inside intron	inside	19844	inside intron	2509	3	10	5' UTR		42349	12047	0	TRUE
321	chr10	76788246	76791704	3459		26.121418	90353.99	3690255	3693713	1656	4012	0.9784654	1.9619424	0.3504792	1.3683479	0.3418424	1.1118511	0.6271537	-2.4848819	-0.5198476	-2.5208793	-0.8193192	-1.645392e+00	2e-07	TRUE	2.17e-05	TRUE	KAT6B	NM_001256468 NM_001256469 NM_012330 NP_001243397 NP_001243398 NP_036462 XM_005269664 XP_005269721	overlaps exon upstream	inside	202075	overlaps exon upstream	0	18	18	overlaps 3'UTR		206209	188188	0	TRUE
322	chr2	179966390	179972292	5903		15.293951	90280.19	9175015	9180917	4050	16872	0.6838403	1.2497500	0.3302911	0.9042596	0.3218429	0.9379105	0.3472026	-1.9198296	-0.4668305	-1.9572108	-0.4141173	-1.847790e+00	2e-07	TRUE	2.17e-05	TRUE	SESTD1	NM_178123 NP_835224 XM_005246944 XP_005247001	overlaps 3'	overlaps 3'	157058	inside exon	0	18	18	3'UTR		162931	81942	0	TRUE
323	chr1	182567758	182569652	1895		47.639347	90276.56	11964565	11966459	4716	5761	0.8830419	0.2152464	0.1554273	0.6452377	4.8971095	0.6816314	0.7832474	-0.4697485	1.5838419	4.5078697	1.6630029	1.863479e+00	2e-07	TRUE	2.17e-05	TRUE	RGS16	NM_002928 NP_002919	overlaps exon upstream	inside	3896	overlaps exon upstream	0	5	5	overlaps 3'UTR		5790	3967	0	TRUE
324	chr8	42932508	42935584	3077		29.252569	90010.15	2603071	2606147	949	3124	0.2451466	0.5007741	0.0465988	0.4836097	0.0473625	0.5577905	0.1512433	-3.4257958	-0.0503168	-3.4023417	0.1555634	-1.727289e+00	2e-07	TRUE	2.17e-05	TRUE	FNTA	NM_001018676 NM_001018677 NM_002027 NP_002018 NR_033698	NA	NA	0	NA	NA	NA	8	NA		0	0	0	TRUE
325	chr3	105374349	105378078	3730		24.106000	89915.38	5547470	5551199	2109	6715	0.3522643	0.8067706	0.0582360	0.4121286	0.0681995	0.3498840	0.5075380	-3.7921758	-0.9690638	-3.5643250	-1.2052820	-6.686427e-01	2e-07	TRUE	2.17e-05	TRUE	CBLB	NM_170662 NP_733762 XM_005247852 XM_005247853 XM_006713796 XM_006713797 XP_005247909 XP_005247910 XP_006713859 XP_006713860 XR_427384 XR_427385	overlaps 3'	overlaps 3'	210188	overlaps exon upstream	0	18	18	overlaps 3'UTR		211157	210418	0	TRUE
326	chr17	64884699	64890839	6141		14.613005	89738.46	6099438	6105578	2274	10207	0.1093514	0.0247215	0.0710393	0.2523985	0.2752012	0.4062089	0.1181874	1.5228521	3.3518659	3.4766497	4.0383844	2.257239e+00	2e-07	TRUE	2.17e-05	TRUE	CACNG5	NM_014404 NM_145811 NP_665810	downstream	downstream	53464	NA	NA	NA	6	NA		50160	7906	0	TRUE
327	chr3	52579376	52582256	2881		31.141781	89719.47	3671517	3674397	1389	6475	0.8590361	1.6733450	0.2505324	1.5799950	0.2501047	1.4380270	0.5081007	-2.7396659	-0.0828149	-2.7421310	-0.2186442	-1.719549e+00	2e-07	TRUE	2.17e-05	TRUE	PBRM1	NM_018165 NM_018313 NM_181041 NM_181042 NP_060783 XM_005265275 XM_005265279 XM_005265280 XM_005265282 XM_005265283 XM_005265288 XM_006713220 XM_006713221 XM_006713222 XM_006713223 XM_006713224 XM_006713225 XM_006713226 XM_006713227 XM_006713228 XM_006713229 XM_006713230 XM_006713231 XM_006713232 XM_006713233 XM_006713234 XP_005265332 XP_005265336 XP_005265337 XP_005265339 XP_005265340 XP_005265345 XP_006713283 XP_006713284 XP_006713285 XP_006713286 XP_006713287 XP_006713288 XP_006713289 XP_006713290 XP_006713291 XP_006713292 XP_006713293 XP_006713294 XP_006713295 XP_006713296 XP_006713297	overlaps exon upstream	inside	137610	overlaps exon upstream	0	30	30	overlaps 3'UTR		140498	131648	0	TRUE
328	chr19	58264620	58269266	4647		19.221587	89322.71	8322861	8327507	2614	7330	0.4781087	0.8567258	0.2141084	0.7525827	0.1707200	0.7011891	0.3778241	-2.0004921	-0.1869835	-2.3272019	-0.2890300	-1.181119e+00	2e-07	TRUE	2.17e-05	TRUE	ZNF587	NM_001204817 NM_032828 NP_001191746 NP_116217	covers exon(s)	inside	6456	covers exon(s)	0	3	6	5' UTR		114468	3940	0	TRUE
329	chr16	24225977	24231933	5957		14.936540	88976.97	2380530	2386486	814	9719	3.3753340	1.2137565	5.9910947	0.9031328	3.2551089	3.2635152	1.2856103	2.3033406	-0.4264689	1.4232268	1.4269478	8.297440e-02	2e-07	TRUE	2.17e-05	TRUE	PRKCB	NM_002738 NM_212535 NP_002729 NP_997700	overlaps 3'	overlaps 3'	378677	overlaps exon upstream	0	17	17	overlaps 3'UTR		384632	378640	0	TRUE
330	chr4	125589134	125593690	4557		19.514637	88928.20	5637401	5641957	2447	9461	0.5469440	1.1017897	0.1981042	0.8182626	0.1746633	0.7896875	0.1580802	-2.4755173	-0.4292132	-2.6572003	-0.4804953	-2.801120e+00	2e-07	TRUE	2.17e-05	TRUE	ANKRD50	NM_001167882 NM_020337 NP_001161354 NP_065070	covers exon(s)	inside	40197	covers exon(s)	0	3	4	overlaps 3'UTR		48683	9893	0	TRUE
331	chr19	1465145	1473245	8101		10.953457	88733.96	296626	304726	80	29059	2.5592035	4.2738761	1.3905926	3.6467250	1.3399108	3.2958538	1.7992479	-1.6198453	-0.2289437	-1.6734082	-0.3748929	-1.248151e+00	2e-07	TRUE	2.17e-05	TRUE	C19orf25	NM_152482 NP_689695 XM_005259505 XM_005259506 XM_006722653 XP_005259562 XP_005259563 XP_006722716	overlaps 3'	overlaps 3'	5983	inside exon	0	3	3	3'UTR		6028	3871	0	TRUE
332	chr22	31721793	31723300	1508		58.814147	88691.73	1609269	1610776	570	3118	1.4264790	2.6627146	0.4095109	2.7137973	0.5030630	2.9936605	1.0492601	-2.7009241	0.0274151	-2.4040867	0.1690128	-1.343525e+00	2e-07	TRUE	2.17e-05	TRUE	PATZ1	NM_014323 NM_032050 NM_032051 NM_032052 NP_055138 NP_114439 NP_114440 NP_114441	overlaps exon upstream	inside	18949	overlaps exon upstream	0	4	4	overlaps 3'UTR		20459	18711	0	TRUE
333	chr3	77695201	77699116	3916		22.601940	88509.20	4851264	4855179	1887	12980	1.3655109	2.6673961	0.5096299	2.2806788	0.4249628	1.7454228	0.3875340	-2.3879103	-0.2259688	-2.6500236	-0.6118555	-2.783037e+00	2e-07	TRUE	2.17e-05	TRUE	ROBO2	NM_001128929 NM_001290039 NM_001290040 NM_001290065 NM_002942 NP_001122401 NP_001276968 NP_001276969 NP_001276994 NP_002933 XM_005264768 XM_005264769 XM_006713279 XP_005264825 XP_005264826 XP_006713342	overlaps 3'	overlaps 3'	605907	overlaps exon upstream	0	27	27	overlaps 3'UTR		609820	605269	0	TRUE
334	chr15	86287857	86292563	4707		18.789050	88440.06	4721315	4726021	2167	9111	0.5527195	0.9274408	0.2888140	0.9116891	0.2896002	0.9401888	0.0846596	-1.6831143	-0.0247133	-1.6791926	0.0196953	-3.453509e+00	2e-07	TRUE	2.17e-05	TRUE	AKAP13	NM_001270546 NM_006738 NM_007200 NM_144767 NP_001257475 NP_006729 NP_009131 XM_005254839 XM_005254840 XM_005254841 XM_005254842 XM_005254843 XM_005254844 XM_005254845 XM_005254846 XM_005254847 XM_005254848 XM_005254849 XM_005254850 XM_005254851 XM_005254852 XM_005254853 XM_005254854 XM_005254855 XM_005254856 XM_006720376 XM_006720377 XM_006720378 XP_005254896 XP_005254897 XP_005254898 XP_005254899 XP_005254900 XP_005254901 XP_005254902 XP_005254903 XP_005254904 XP_005254905 XP_005254906 XP_005254907 XP_005254908 XP_005254909 XP_005254910 XP_005254911 XP_005254912 XP_005254913 XP_006720439 XP_006720440 XP_006720441	overlaps exon upstream	inside	67589	overlaps exon upstream	0	24	24	overlaps 3'UTR		72321	59827	0	TRUE
335	chr1	79869657	79872669	3013		29.326170	88359.75	6581431	6584443	2621	5143	0.0056863	0.0001209	0.0001304	0.0008892	0.0000662	0.3823128	0.0000000	0.1091407	2.8783312	-0.8687929	11.6263310	-1.000000e+100	2e-07	TRUE	2.17e-05	TRUE	ELTD1	NM_022159 NP_071442	upstream	upstream	397162	NA	NA	NA	15	NA		117046	115500	0	TRUE
336	chr1	120162022	120166236	4215		20.937618	88252.06	8738336	8742550	3547	6740	0.4526372	0.8764818	0.2007557	0.7204271	0.0856442	0.6990222	0.1058847	-2.1262832	-0.2828716	-3.3552966	-0.3263858	-3.049231e+00	2e-07	TRUE	2.17e-05	TRUE	ZNF697	NM_001080470 NP_001073939 XM_005271315 XM_006711032 XP_005271372 XP_006711095	inside exon	inside	24154	inside exon	0	3	3	overlaps 3'UTR		28390	3395	0	TRUE
337	chr1	40701464	40706544	5081		17.361005	88211.27	4124976	4130056	1456	5081	0.4593519	0.7863377	0.2162659	0.7347993	0.1986205	0.7116898	0.3837980	-1.8623429	-0.0977986	-1.9851344	-0.1439005	-1.034802e+00	2e-07	TRUE	2.17e-05	TRUE	RLF	NM_012421 NP_036553	inside exon	inside	4988	inside exon	0	2	2	overlaps 3'UTR		10117	8950	0	TRUE
338	chr6	34100717	34101639	923		95.348766	88006.91	2419485	2420407	857	144560	0.3638458	0.0581094	0.0711722	0.1333597	0.1768933	0.4260084	6.3608373	0.2925420	1.1984793	1.6060360	2.8740385	6.774302e+00	2e-07	TRUE	2.17e-05	TRUE	GRM4	NM_000841 NM_001256809 NM_001256810 NM_001256811 NM_001256812 NM_001256813 NM_001256814 NM_001282847 NP_000832 NP_001243738 NP_001243740 NP_001243741 NP_001243742 NP_001269776 XM_006715071 XP_006715134 XR_427829	overlaps 5'	overlaps 5'	0	covers exon(s)	0	1	3	overlaps 5' UTR		42172	41429	0	TRUE
339	chr17	41166622	41168165	1544		56.980398	87977.73	4035965	4037508	1474	6567	4.2326390	6.4568572	1.4702321	10.6663539	2.8190303	7.0194522	1.3817521	-2.1347882	0.7241631	-1.1956331	0.1205263	-2.224333e+00	2e-07	TRUE	2.17e-05	TRUE	VAT1	NM_006373 NP_006364	overlaps exon upstream	inside	6294	overlaps exon upstream	0	6	6	overlaps 3'UTR		7837	6261	0	TRUE
340	chr12	50260677	50264439	3763		23.301351	87682.98	2878441	2882203	1138	4697	7.9646948	2.1232407	12.8239392	2.3026233	11.5564626	1.4081762	10.2986743	2.5944997	0.1170105	2.4443601	-0.5924400	2.278119e+00	2e-07	TRUE	2.17e-05	TRUE	FAIM2	NM_012306 NP_036438 XM_005268730 XP_005268787	overlaps 3'	overlaps 3'	33321	overlaps exon upstream	0	12	12	overlaps 3'UTR		37081	33288	0	TRUE
341	chr14	69994967	69998267	3301		26.552711	87650.50	2817019	2820319	1111	12775	0.0639651	0.0139934	0.0372367	0.0059279	0.0948350	0.0889051	0.7074860	1.4119836	-1.2391455	2.7606780	2.6675246	5.659888e+00	2e-07	TRUE	2.17e-05	TRUE	PLEKHD1	NM_001161498 NP_001154970	overlaps 3'	overlaps 3'	43496	inside exon	0	13	13	overlaps 3'UTR		43744	43453	0	TRUE
342	chr14	58462825	58471522	8698		10.071001	87597.56	1992543	2001240	747	11646	0.4079023	0.7738718	0.2299645	0.3365122	0.1750441	0.3455111	0.3155764	-1.7506832	-1.2014359	-2.1443762	-1.1633625	-1.294105e+00	2e-07	TRUE	2.17e-05	TRUE	C14orf37	NM_001001872 NP_001001872 XM_006720051 XP_006720114	overlaps 3'	overlaps 3'	134610	overlaps exon upstream	0	7	7	overlaps 3'UTR		134741	134622	0	TRUE
343	chr22	43901374	43903723	2350		37.216353	87458.43	3047656	3050005	1077	6274	6.8197768	16.0757964	3.4119394	3.1960778	1.0643699	0.4792839	0.0384344	-2.2362263	-2.3305158	-3.9168187	-5.0678659	-8.708275e+00	2e-07	TRUE	2.17e-05	TRUE	MPPED1	NM_001044370 NP_001037835	overlaps 3'	overlaps 3'	87613	overlaps exon upstream	0	7	7	overlaps 3'UTR		89039	87394	0	TRUE
344	chr22	41791747	41795329	3583		24.367491	87308.72	2709617	2713199	949	11975	1.3151070	0.3722812	1.9294417	0.3893406	1.7697964	0.5631785	3.5616592	2.3737189	0.0646400	2.2491188	0.5971996	3.258085e+00	2e-07	TRUE	2.17e-05	TRUE	TEF	NM_001145398 NM_003216 NP_001138870 NP_003207	overlaps exon upstream	inside	13814	overlaps exon upstream	0	4	4	overlaps 3'UTR		17399	13915	0	TRUE
345	chr1	247460671	247464629	3959		22.032058	87224.92	15768835	15772793	6289	15729	0.5498483	0.9636638	0.2725655	0.7729061	0.2338156	0.6914113	0.4969254	-1.8219268	-0.3182368	-2.0431585	-0.4789858	-9.555006e-01	2e-07	TRUE	2.17e-05	TRUE	ZNF496	NM_032752 NP_116141 XM_005273328 XM_005273330 XM_005273331 XM_005273332 XM_005273333 XM_006711838 XP_005273385 XP_005273387 XP_005273388 XP_005273389 XP_005273390 XP_006711901	overlaps 3'	overlaps 3'	30416	overlaps exon upstream	0	9	9	overlaps 3'UTR		31423	29059	0	TRUE
346	chr8	29190604	29194931	4328		20.105771	87017.78	1816064	1820391	666	9927	0.7776950	1.5781175	0.1928651	1.1839768	0.2428496	1.6799399	0.7397135	-3.0325405	-0.4145638	-2.7000693	0.0902050	-1.093166e+00	2e-07	TRUE	2.17e-05	TRUE	DUSP4	NM_001394 NM_057158 NP_001385 NP_476499	overlaps exon upstream	inside	13336	overlaps exon upstream	0	4	4	overlaps 3'UTR		17688	13252	0	TRUE
347	chr6	72012401	72018750	6350		13.674325	86831.96	4315143	4321492	1563	9211	0.6909251	0.1646706	0.9646011	0.3086964	1.1806077	0.3813978	1.4988130	2.5503498	0.9066061	2.8418751	1.2117137	3.186166e+00	2e-07	TRUE	2.17e-05	TRUE	OGFRL1	NM_024576 NP_078852 XM_005248765 XP_005248822	downstream	downstream	13924	NA	NA	NA	7	NA		13753	13112	0	TRUE
348	chr11	118033519	118037801	4283		20.244574	86707.51	7477135	7481417	2811	5948	1.3552742	0.1872287	2.1826855	0.2072689	2.1718001	0.1581818	2.8483567	3.5432305	0.1467019	3.5360176	-0.2432178	3.927256e+00	2e-07	TRUE	2.17e-05	TRUE	SCN2B	NM_004588 NP_004579	inside exon	inside	9536	inside exon	0	4	4	overlaps 3'UTR		13818	9544	0	TRUE
349	chr17	35293995	35295753	1759		49.255984	86641.28	3226641	3228399	1204	37636	0.0463005	0.0122028	0.0008662	0.0231556	0.0019349	1.2342240	0.5044869	-3.8164336	0.9241535	-2.6569016	6.6602498	5.369534e+00	2e-07	TRUE	2.17e-05	TRUE	LHX1	NM_005568 NP_005559	overlaps 5'	overlaps 5'	0	overlaps exon downstream	0	1	5	overlaps 5' UTR		7143	4933	0	TRUE
350	chr15	85163833	85166379	2547		33.839897	86190.22	4622849	4625395	2118	3719	0.3499480	0.7432913	0.0834591	0.5789484	0.0873772	0.5435201	0.1503309	-3.1547862	-0.3604929	-3.0885982	-0.4515943	-2.305786e+00	2e-07	TRUE	2.17e-05	TRUE	ZSCAN2	NM_001007072 NM_017894 NM_181877 NP_001007073 NP_060364 NP_870992 XM_005254935 XM_006720596 XP_005254992 XP_006720659	covers exon(s)	inside	16782	covers exon(s)	0	2	4	inside transcription region		19823	19347	0	TRUE
351	chr1	75667875	75672405	4531		18.965235	85931.48	6344632	6349162	2522	20271	0.4030900	0.9405763	0.1023691	0.5453226	0.0721913	0.2556714	0.0142459	-3.1997650	-0.7864351	-3.7036490	-1.8792542	-6.044928e+00	2e-07	TRUE	2.17e-05	TRUE	SLC44A5	NM_001130058 NM_152697 NP_001123530 NP_689910 XM_006710444 XM_006710445 XP_006710507 XP_006710508	overlaps 3'	overlaps 3'	471205	overlaps exon upstream	0	22	22	overlaps 3'UTR		471535	36359	0	TRUE
352	chr19	33459819	33462559	2741		31.330937	85878.10	4156996	4159736	1332	13897	0.4932874	0.9769154	0.1553346	0.8529649	0.1400323	0.6968833	0.2569391	-2.6528545	-0.1957472	-2.8024738	-0.4873165	-1.926807e+00	2e-07	TRUE	2.17e-05	TRUE	CEP89	NM_032816 NP_116205 XM_005259344 XM_005259345 XM_005259346 XP_005259401 XP_005259402 XP_005259403	inside exon	inside	310	inside exon	0	2	2	overlaps 3'UTR		3054	422	0	TRUE
353	chr3	152552228	152558688	6461		13.289431	85863.01	8178067	8184527	3417	7864	0.1454131	0.0634913	0.0884604	0.5189628	0.2077858	0.4662666	0.0536610	0.4784742	3.0310010	1.7104671	2.8765250	-2.426839e-01	2e-07	TRUE	2.17e-05	TRUE	P2RY1	NM_002563 NP_002554	covers	covers	0	NA	NA	NA	1	NA		3107	1121	0	TRUE
354	chr12	133633537	133637614	4078		21.029572	85758.59	8594172	8598249	3469	6345	0.7053243	1.3917644	0.2612406	1.0486918	0.2258187	0.9350189	0.4017260	-2.4134640	-0.4083243	-2.6236780	-0.5738476	-1.792631e+00	2e-07	TRUE	2.17e-05	TRUE	ZNF84	NM_001127372 NM_001289971 NM_001289972 NM_003428 NP_001120844 NP_001276900 NP_001276901 NP_003419 XM_005266184 XM_005266185 XM_005266186 XM_006719747 XP_005266241 XP_005266242 XP_005266243 XP_006719810	overlaps exon upstream	inside	19124	overlaps exon upstream	0	5	5	overlaps 3'UTR		25472	17464	0	TRUE
355	chr20	35410134	35415147	5014		17.101891	85748.88	2299484	2304497	904	51775	0.9036960	1.4190853	0.2955366	1.1511998	0.3224303	1.5015252	3.7581940	-2.2635525	-0.3018231	-2.1379022	0.0814673	1.405078e+00	2e-07	TRUE	2.17e-05	TRUE	SOGA1	NM_080627 NM_152257 NM_199181 NP_542194 NP_954650	overlaps 3'	overlaps 3'	76940	overlaps exon upstream	0	15	15	overlaps 3'UTR		79909	76859	0	TRUE
356	chr14	21989490	21993791	4302		19.883615	85539.31	182236	186537	54	5171	1.2480932	1.4637166	0.6408535	2.2494807	1.0599757	2.6140556	2.9645295	-1.1915697	0.6199557	-0.4656051	0.8366536	1.018167e+00	2e-07	TRUE	2.17e-05	TRUE	SALL2	NM_005407 NP_005398 XM_005267983 XP_005268040	covers exon(s)	inside	11546	covers exon(s)	0	4	4	overlaps 3'UTR		15864	14913	0	TRUE
357	chr16	69148237	69151557	3321		25.738139	85476.36	4707442	4710762	1622	8057	0.4213365	1.1284422	0.0180688	0.4405032	0.0212879	0.9788351	0.0299462	-5.9646870	-1.3571082	-5.7281536	-0.2051947	-5.235814e+00	2e-07	TRUE	2.17e-05	TRUE	HAS3	NM_001199280 NM_005329 NM_138612 NP_001186209 NP_005320 NP_619515 XM_005255920 XM_005255921 XP_005255977 XP_005255978	overlaps exon upstream	inside	6794	overlaps exon upstream	0	4	4	overlaps 3'UTR		10127	5870	0	TRUE
358	chr9	37503038	37509907	6870		12.441737	85474.73	1767796	1774665	784	26380	0.2469022	0.4143593	0.1157948	0.3864160	0.1265925	0.3375427	0.2453706	-1.8393123	-0.1007275	-1.7106901	-0.2958121	-7.559201e-01	2e-07	TRUE	2.17e-05	TRUE	POLR1E	NM_001282766 NM_022490 NP_001269695 NP_071935 XM_005251547 XP_005251604	overlaps 3'	overlaps 3'	16888	overlaps exon upstream	0	11	11	overlaps 3'UTR		17543	16761	0	TRUE
359	chr17	35289965	35290811	847		100.793061	85371.72	3223955	3224801	1204	37636	0.0848196	0.0179985	0.0022973	0.0367241	0.0071320	1.0851560	1.3438337	-2.9698382	1.0288459	-1.3355072	5.9138783	6.222330e+00	2e-07	TRUE	2.17e-05	TRUE	LHX1	NM_005568 NP_005559	upstream	upstream	3961	NA	NA	NA	5	NA		7143	4933	0	TRUE
360	chrX	48435849	48439464	3616		23.589266	85298.79	1664646	1668261	823	6601	1.3808590	2.3858788	0.6484514	2.1605410	0.6224715	2.3423127	0.9827406	-1.8794504	-0.1431281	-1.9384410	-0.0265870	-1.279638e+00	2e-07	TRUE	2.17e-05	TRUE	RBM3	NM_001017430 NM_001017431 NM_006743 NP_006734	overlaps exon upstream	inside	3108	overlaps exon upstream	0	7	7	3'UTR		6812	1905	0	TRUE
361	chr11	122680454	122685186	4733		17.996304	85176.51	7938883	7943615	2990	8073	0.3293627	0.3325672	0.1856112	0.3231075	0.1506684	1.4693085	1.8072679	-0.8413624	-0.0416319	-1.1422694	2.1434194	2.442092e+00	2e-07	TRUE	2.17e-05	TRUE	UBASH3B	NM_032873 NP_116262 XM_005271712 XP_005271769	overlaps exon upstream	inside	154056	overlaps exon upstream	0	14	14	overlaps 3'UTR		158789	153836	0	TRUE
362	chr7	14184675	14188863	4189		20.246251	84811.54	979211	983399	402	4189	0.4633953	0.0344663	0.7487361	0.1454942	0.9937019	0.2953542	0.1370681	4.4411997	2.0777036	4.8495554	3.0991882	1.991635e+00	2e-07	TRUE	2.17e-05	TRUE	DGKB	NM_004080 NM_145695 NP_004071 NP_663733 XM_005249628 XM_005249629 XM_005249630 XM_005249631 XP_005249685 XP_005249686 XP_005249687 XP_005249688 XR_428070 XR_428071	inside exon	inside	753687	inside exon	0	24	24	overlaps 3'UTR		757876	692132	0	TRUE
363	chr2	181932921	181939100	6180		13.723529	84811.41	9239454	9245633	4078	18638	0.1127109	0.2386408	0.0259920	0.1635962	0.0228511	0.2047319	0.1238094	-3.1986995	-0.5447011	-3.3845062	-0.2211050	-9.467192e-01	2e-07	TRUE	2.17e-05	TRUE	UBE2E3	NM_001278554 NM_001278555 NM_006357 NM_182678 NP_001265483 NP_001265484 NP_006348 NP_872619 XM_005246244 XP_005246301	downstream	downstream	87809	NA	NA	NA	7	NA		83038	80845	0	TRUE
364	chr2	110371902	110376553	4652		18.230606	84808.78	6034739	6039390	2585	5179	0.2476455	0.4760262	0.0727349	0.4846150	0.0778301	0.5711368	0.0471969	-2.7103218	0.0257979	-2.6126403	0.2627954	-3.334277e+00	2e-07	TRUE	2.17e-05	TRUE	SOWAHC	NM_023016 NP_075392	overlaps 5'	overlaps 5'	0	inside exon	0	1	1	overlaps 3'UTR		4653	1577	0	TRUE
365	chr2	173916366	173918062	1697		49.936581	84742.38	8841795	8843491	3880	5714	2.7334424	0.2057909	5.3417389	0.3812331	3.4978816	0.3838286	1.1029671	4.6980586	0.8894944	4.0872306	0.8992833	2.422139e+00	2e-07	TRUE	2.17e-05	TRUE	RAPGEF4	NM_001100397 NM_001282899 NM_001282900 NM_001282901 NM_007023 NP_001093867 NP_001269828 NP_001269829 NP_001269830 NP_008954 XM_005246246 XM_006712205 XM_006712206 XP_005246303 XP_006712268 XP_006712269	overlaps 3'	overlaps 3'	230051	overlaps exon upstream	0	28	28	overlaps 3'UTR		231305	229802	0	TRUE
366	chr2	227658353	227664548	6196		13.675282	84732.05	11625977	11632172	5098	9603	0.2427806	0.4688376	0.1020583	0.3379680	0.0697522	0.2899009	0.1910763	-2.1996946	-0.4722016	-2.7487774	-0.6935286	-1.294939e+00	2e-07	TRUE	2.17e-05	TRUE	IRS1	NM_005544 NP_005535 XM_005246534 XM_006712512 XP_005246591 XP_006712575	overlaps 5'	overlaps 5'	0	overlaps exon downstream	0	1	2	overlaps 5' UTR		67473	3728	0	TRUE
367	chr3	182987286	182991118	3833		22.099637	84707.91	9375759	9379591	3969	7460	0.2274703	0.4189657	0.0368976	0.6005955	0.0491672	0.6357803	0.1031174	-3.5052337	0.5195618	-3.0910644	0.6016962	-2.022544e+00	2e-07	TRUE	2.17e-05	TRUE	B3GNT5	NM_032047 NP_114436 XM_005247823 XM_005247824 XM_005247825 XM_005247826 XM_005247827 XP_005247880 XP_005247881 XP_005247882 XP_005247883 XP_005247884	inside exon	inside	4196	inside exon	0	2	2	overlaps 3'UTR		8089	1136	0	TRUE
368	chr8	67428125	67430756	2632		32.136700	84583.80	3556506	3559137	1349	4986	2.6613329	0.4292259	4.9114706	0.6273995	3.7614736	0.1462305	0.4565196	3.5163462	0.5476474	3.1314891	-1.5534931	8.893970e-02	2e-07	TRUE	2.17e-05	TRUE	C8orf46	NM_152765 NP_689978	overlaps exon upstream	inside	5801	overlaps exon upstream	0	3	3	overlaps 3'UTR		8435	2473	0	TRUE
369	chr11	76506653	76510362	3710		22.788015	84543.53	5438572	5442281	1916	22136	0.2646651	0.5496936	0.0800658	0.4244304	0.0820208	0.3926473	0.0376986	-2.7793702	-0.3730997	-2.7445650	-0.4853937	-3.866044e+00	2e-07	TRUE	2.17e-05	TRUE	TSKU	NM_001258210 NM_015516 NP_001245139 NP_056331 XM_005273892 XP_005273949	overlaps 3'	overlaps 3'	12368	inside exon	0	2	2	overlaps 3'UTR		14913	1061	0	TRUE
370	chr14	56763316	56768293	4978		16.974418	84498.65	1899388	1904365	702	18603	0.4866029	1.0677000	0.1053352	0.5317296	0.1593359	1.0315382	0.5184163	-3.3414472	-1.0057417	-2.7443634	-0.0497091	-1.042323e+00	2e-07	TRUE	2.17e-05	TRUE	PELI2	NM_021255 NP_067078 XM_005267890 XM_006720211 XP_005267947 XP_006720274	overlaps 3'	overlaps 3'	178223	overlaps exon upstream	0	6	6	overlaps 3'UTR		182938	178505	0	TRUE
371	chr3	35680172	35685467	5296		15.941780	84427.67	1880719	1886014	758	15181	0.4251723	0.7743778	0.2114405	0.3917118	0.1681430	0.2754065	0.7930252	-1.8727858	-0.9832452	-2.2033489	-1.4914750	3.432910e-02	2e-07	TRUE	2.17e-05	TRUE	ARPP21	NM_001025068 NM_001025069 NM_001267616 NM_001267617 NM_001267618 NM_001267619 NM_016300 NM_198399 NP_001020239 NP_001020240 NP_001254545 NP_001254546 NP_001254547 NP_001254548 NP_057384 NP_938409 XM_005264810 XM_005264811 XM_005264812 XM_005264813 XM_005264815 XM_005264816 XM_006712942 XM_006712943 XM_006712944 XM_006712945 XP_005264867 XP_005264868 XP_005264869 XP_005264870 XP_005264872 XP_005264873 XP_006713005 XP_006713006 XP_006713007 XP_006713008	overlaps 5'	overlaps 5'	0	overlaps exon downstream	0	1	20	5' UTR		152139	112206	0	TRUE
372	chr2	101962010	101967536	5527		15.264731	84368.17	5622236	5627762	2412	9821	1.0042002	0.0820386	2.0815901	0.2728267	0.9278609	0.1923288	0.0127235	4.6652393	1.7336100	3.4995338	1.2292002	-2.688806e+00	2e-07	TRUE	2.17e-05	TRUE	CREG2	NM_153836 NP_722578	overlaps 3'	overlaps 3'	36429	overlaps exon upstream	0	4	4	overlaps 3'UTR		39149	36534	0	TRUE
373	chr6	33982296	33986360	4065		20.754440	84366.80	2324424	2328488	857	144560	0.0150694	0.0005519	0.0019671	0.0010237	0.0047163	0.0052342	0.3088160	1.8336453	0.8913191	3.0952236	3.2455601	9.128187e+00	2e-07	TRUE	2.17e-05	TRUE	GRM4	NM_000841 NM_001256809 NM_001256810 NM_001256811 NM_001256812 NM_001256813 NM_001256814 NM_001282847 NP_000832 NP_001243738 NP_001243740 NP_001243741 NP_001243742 NP_001269776 XM_006715071 XP_006715134 XR_427829	downstream	downstream	44656	NA	NA	NA	8	NA		41393	36255	0	TRUE
374	chr20	35405844	35410102	4259		19.805960	84353.59	2295194	2299452	904	51775	1.6521272	2.4593311	0.6103160	2.1491493	0.7422158	3.1037765	6.5048137	-2.0106378	-0.1945003	-1.7283553	0.3357587	1.403242e+00	2e-07	TRUE	2.17e-05	TRUE	SOGA1	NM_080627 NM_152257 NM_199181 NP_542194 NP_954650	overlaps 3'	overlaps 3'	78174	overlaps exon upstream	0	15	15	overlaps 3'UTR		82431	61640	0	TRUE
375	chr11	64379397	64387850	8454		9.959926	84201.21	3880801	3889254	1406	16873	0.1455408	0.1386007	0.0998514	0.1154683	0.0832342	0.1215212	0.8862773	-0.4730807	-0.2634375	-0.7356864	-0.1897273	2.676823e+00	2e-07	TRUE	2.17e-05	TRUE	NRXN2	NM_015080 NM_138732 NM_138734 NP_055895 NP_620060 NP_620063 XM_005274400 XM_005274401 XM_005274402 XM_005274406 XM_006718742 XM_006718743 XM_006718744 XM_006718745 XM_006718746 XM_006718747 XM_006718748 XM_006718749 XP_005274457 XP_005274458 XP_005274459 XP_005274463 XP_006718805 XP_006718806 XP_006718807 XP_006718808 XP_006718809 XP_006718810 XP_006718811 XP_006718812 XR_428930 XR_428931	covers exon(s)	inside	102810	covers exon(s)	0	19	20	inside transcription region		117014	106503	0	TRUE
376	chr12	65268781	65274588	5808		14.457418	83968.68	4243203	4249010	1557	8708	0.4866070	0.9385710	0.2528545	0.4893067	0.1836606	0.4623918	0.3098495	-1.8921585	-0.9397268	-2.3534239	-1.0213501	-1.598898e+00	2e-07	TRUE	2.17e-05	TRUE	TBC1D30	NM_015279 NP_056094 XM_006719300 XM_006719301 XP_006719363 XP_006719364	inside exon	inside	50429	inside exon	0	12	12	overlaps 3'UTR		56446	50908	0	TRUE
377	chr10	81072397	81076234	3838		21.870473	83938.87	3897077	3900914	1757	5555	2.7430366	4.6356460	1.3845548	4.4960265	0.9981479	4.2349881	2.1825458	-1.7433482	-0.0441199	-2.2154449	-0.1304125	-1.086758e+00	2e-07	TRUE	2.17e-05	TRUE	ZMIZ1	NM_020338 NP_065071 XM_005269987 XM_005269988 XM_006717923 XM_006717924 XM_006717925 XP_005270044 XP_005270045 XP_006717986 XP_006717987 XP_006717988	overlaps exon upstream	inside	6540	overlaps exon upstream	0	3	3	overlaps 3'UTR		10428	6531	0	TRUE
378	chr1	160007265	160012326	5062		16.574730	83901.28	10473616	10478677	4101	5403	1.3037557	0.2315048	2.0453507	0.3670002	2.5324651	0.3146148	1.0581906	3.1432343	0.6647387	3.4514284	0.4425443	2.192486e+00	2e-07	TRUE	2.17e-05	TRUE	KCNJ10	NM_002241 NP_002232	overlaps exon upstream	inside	27725	overlaps exon upstream	0	2	2	overlaps 5' UTR		32794	1139	0	TRUE
379	chr12	15747867	15751284	3418		24.502879	83750.84	1263829	1267246	466	7187	0.9801081	2.0104134	0.3927413	1.2388176	0.3403646	1.3610666	0.1643164	-2.3558410	-0.6985284	-2.5623394	-0.5627545	-3.612944e+00	2e-07	TRUE	2.17e-05	TRUE	PTPRO	NM_002848 NM_030667 NM_030668 NM_030669 NM_030670 NM_030671 NP_002839 NP_109592 NP_109593 NP_109594 NP_109595 NP_109596	overlaps 3'	overlaps 3'	48589	overlaps exon upstream	0	13	13	overlaps 3'UTR		51987	45818	0	TRUE
380	chr1	147095638	147097999	2362		35.292489	83360.86	9104475	9106836	3685	15718	0.8877010	1.7792960	0.2989144	1.3040301	0.2793223	1.2428656	0.6125703	-2.5735021	-0.4483294	-2.6713040	-0.5176362	-1.538359e+00	2e-07	TRUE	2.17e-05	TRUE	BCL9	NM_004326 NP_004317 XM_005272971 XM_005277417 XM_005277418 XM_006711483 XP_005273028 XP_005277474 XP_005277475 XP_006711546	overlaps 3'	overlaps 3'	12261	overlaps exon upstream	0	7	7	inside transcription region		13380	13121	0	TRUE
381	chr13	100633987	100637835	3849		21.642109	83300.48	3292414	3296262	1417	29053	0.2906971	0.1202823	0.0533619	0.4826801	0.1082794	2.9996956	2.8839782	-1.1725423	2.0046426	-0.1516664	4.6403193	4.583563e+00	2e-07	TRUE	2.17e-05	TRUE	ZIC2	NM_007129 NP_009060	overlaps 5'	overlaps 5'	0	covers exon(s)	0	1	3	overlaps 5' UTR		4993	3617	0	TRUE
382	chr12	54629251	54635691	6441		12.932776	83300.01	3407743	3414183	1307	10952	1.3084327	2.0465306	0.6357080	2.5944160	0.6418514	2.1373054	0.8159114	-1.6867441	0.3422296	-1.6728691	0.0626128	-1.326696e+00	2e-07	TRUE	2.17e-05	TRUE	CBX5	NM_001127321 NM_001127322 NM_012117 NP_001120793 NP_001120794 NP_036249	overlaps exon upstream	inside	38224	overlaps exon upstream	0	5	5	overlaps 3'UTR		49184	15895	0	TRUE
383	chr9	129981015	129985385	4371		18.983308	82976.04	5415302	5419672	2439	14746	1.0598661	1.9444404	0.4899240	1.3944846	0.4044002	1.6790976	0.9159494	-1.9887250	-0.4796230	-2.2654994	-0.2116689	-1.086015e+00	2e-07	TRUE	2.17e-05	TRUE	RALGPS1	NM_001190728 NM_001190729 NM_001190730 NM_014636 NP_001177657 NP_001177658 NP_001177659 NP_055451 XM_005252318 XM_006717327 XM_006717328 XM_006717329 XM_006717330 XM_006717331 XM_006717332 XM_006717333 XM_006717334 XM_006717335 XP_005252375 XP_006717390 XP_006717391 XP_006717392 XP_006717393 XP_006717394 XP_006717395 XP_006717396 XP_006717397 XP_006717398	overlaps exon upstream	inside	303962	overlaps exon upstream	0	19	19	overlaps 3'UTR		308392	256479	0	TRUE
384	chr4	10442960	10448163	5204		15.943081	82967.79	1136934	1142137	436	6634	0.3407607	0.6120163	0.1467559	0.5412126	0.1421082	0.4684586	0.2493407	-2.0601516	-0.1773748	-2.1065802	-0.3856485	-1.295452e+00	2e-07	TRUE	2.17e-05	TRUE	ZNF518B	NM_053042 NP_444270 XM_005248193 XP_005248250	inside exon	inside	10869	inside exon	0	3	3	overlaps 5' UTR		17528	3224	0	TRUE
385	chr20	33861916	33865098	3183		26.031020	82856.74	2063973	2067155	824	57754	2.2368574	3.3769064	1.1031102	2.9610318	1.1803299	3.5429132	5.4848713	-1.6141253	-0.1896022	-1.5165121	0.0692339	6.997556e-01	2e-07	TRUE	2.17e-05	TRUE	EDEM2	NM_001145025 NM_018217 NP_001138497 NP_060687 NR_026728	inside intron	inside	862	inside intron	-751	1	14	5' UTR		160132	28423	0	TRUE
386	chr16	84155701	84158338	2638		31.373892	82764.33	5772109	5774746	2055	3736	2.3513346	4.2619330	0.8627275	4.4867194	0.9254990	3.7405979	0.9906125	-2.3045311	0.0741531	-2.2032045	-0.1882390	-2.105115e+00	2e-07	TRUE	2.17e-05	TRUE	HSDL1	NM_001146051 NM_031463 NP_001139523 NP_113651 XM_005256189 XP_005256246	overlaps 3'	overlaps 3'	20462	overlaps exon upstream	0	7	7	overlaps 3'UTR		23056	6691	0	TRUE
387	chr7	121650384	121654077	3694		22.396144	82731.36	6439338	6443031	2751	8944	3.2201682	6.1357183	1.0908425	5.8154279	1.4358311	3.4184187	0.8946147	-2.4917894	-0.0773469	-2.0953462	-0.8439032	-2.777894e+00	2e-07	TRUE	2.17e-05	TRUE	PTPRZ1	NM_001206838 NM_001206839 NM_002851 NP_001193767 NP_001193768 NP_002842 XM_005250519 XM_006716076 XP_005250576 XP_006716139	covers exon(s)	inside	137225	covers exon(s)	0	12	30	inside transcription region		188931	187720	0	TRUE
388	chr3	147112306	147114440	2135		38.744578	82719.67	7939194	7941328	3297	52751	0.0989508	0.0139145	0.0104281	0.1291297	0.0314024	0.8688257	1.3999141	-0.4161208	3.2141557	1.1742833	5.9644013	6.652601e+00	2e-07	TRUE	2.17e-05	TRUE	ZIC4	NM_001168378 NM_001168379 NM_001243256 NM_032153 NP_001161850 NP_001161851 NP_001230185 NP_115529 NR_033118 NR_033119 NR_040762	inside intron	inside	10156	inside intron	3273	3	4	inside transcription region		20761	13938	0	TRUE
389	chr7	83587053	83591145	4093		20.121630	82357.83	4278801	4282893	1844	9571	0.3706649	0.8725796	0.1155324	0.3820962	0.0817239	0.2165376	0.0106454	-2.9169897	-1.1913510	-3.4164568	-2.0106689	-6.356991e+00	2e-07	TRUE	2.17e-05	TRUE	SEMA3A	NM_006080 NP_006071 XM_005250110 XM_005250111 XM_006715838 XM_006715839 XP_005250167 XP_005250168 XP_006715901 XP_006715902	overlaps 3'	overlaps 3'	233072	overlaps exon upstream	0	17	17	overlaps 3'UTR		236558	233215	0	TRUE
390	chr5	174866998	174870589	3592		22.911795	82299.17	8205585	8209176	3505	8580	0.2842508	0.1056701	0.2562803	0.5975851	0.6520709	0.0219909	0.0308836	1.2781552	2.4995766	2.6254612	-2.2645869	-1.774656e+00	2e-07	TRUE	2.17e-05	TRUE	DRD1	NM_000794 NP_000785	overlaps 3'	overlaps 3'	574	overlaps exon upstream	0	2	2	overlaps 5' UTR		3488	1340	0	TRUE
391	chr19	1256992	1259141	2150		38.267826	82275.83	210827	212976	71	42758	1.6753735	3.1727887	0.5886953	3.0052121	0.5638108	2.5554419	0.7599898	-2.4301583	-0.0782846	-2.4924685	-0.3121787	-2.061700e+00	2e-07	TRUE	2.17e-05	TRUE	MIDN	NM_177401 NP_796375 XM_005259671 XM_005259672 XP_005259728 XP_005259729	overlaps exon upstream	inside	8440	overlaps exon upstream	0	8	8	overlaps 3'UTR		10590	6975	0	TRUE
392	chr1	247196994	247201729	4736		17.329604	82073.00	15719985	15724720	6275	5846	0.2334278	0.4731723	0.0736432	0.3723141	0.0534613	0.3236535	0.1591466	-2.6837404	-0.3458451	-3.1457999	-0.5479155	-1.572010e+00	2e-07	TRUE	2.17e-05	TRUE	ZNF670	NM_001204220 NM_033213 NP_001191149 NP_149990	overlaps 3'	overlaps 3'	40386	overlaps exon upstream	0	4	4	overlaps 3'UTR		44175	41147	0	TRUE
393	chr11	66816052	66818332	2281		35.967448	82041.75	4519899	4522179	1543	28190	0.6386715	0.0376245	0.9460846	0.0749766	0.5261007	0.2283979	3.9840160	4.6522243	0.9947669	3.8055941	2.6018047	6.726407e+00	2e-07	TRUE	2.17e-05	TRUE	SYT12	NM_001177880 NM_177963 NP_001171351 NP_808878 XM_006718737 XP_006718800	overlaps exon upstream	inside	25236	overlaps exon upstream	0	8	8	overlaps 3'UTR		27518	18612	0	TRUE
394	chr8	79513972	79517806	3835		21.383768	82006.75	4034543	4038377	1598	11825	4.5147791	8.0360672	1.7097691	7.8951723	1.8749000	9.8106776	3.0449379	-2.2326881	-0.0255189	-2.0996760	0.2878632	-1.400077e+00	2e-07	TRUE	2.17e-05	TRUE	PKIA	NM_006823 NM_181839 NP_006814 NP_862822	overlaps 3'	overlaps 3'	10506	overlaps exon upstream	0	3	3	overlaps 3'UTR		14036	3436	0	TRUE
395	chr19	11727505	11730026	2522		32.485916	81929.48	1978328	1980849	598	7640	0.9380392	1.7691094	0.2889719	1.7623461	0.2785129	2.1082140	0.5455240	-2.6140220	-0.0055260	-2.6672072	0.2529981	-1.697309e+00	2e-07	TRUE	2.17e-05	TRUE	ZNF627	NM_001290083 NM_001290084 NM_001290085 NM_145295 NP_001277012 NP_001277013 NP_001277014 NP_660338 XR_244093 XR_248529 XR_253848	overlaps 3'	overlaps 3'	19270	overlaps exon upstream	0	4	4	overlaps 3'UTR		21739	20261	0	TRUE
396	chr5	65119095	65125089	5995		13.650994	81837.71	2561443	2567437	1087	6482	0.3656116	0.6257129	0.2049372	0.5431792	0.1682583	0.5979593	0.0648061	-1.6103194	-0.2040726	-1.8948236	-0.0654537	-3.271298e+00	2e-07	TRUE	2.17e-05	TRUE	NLN	NM_020726 NP_065777 XM_005248559 XM_006714661 XP_005248616 XP_006714724	inside exon	inside	37493	inside exon	0	7	7	3'UTR		43509	37048	0	TRUE
397	chr22	42605656	42611347	5692		14.347601	81666.54	2897513	2903204	1003	5692	0.6879579	1.2342506	0.3392057	1.0300837	0.2808898	0.6120703	0.4000605	-1.8634032	-0.2608738	-2.1355593	-1.0118660	-1.625345e+00	2e-07	TRUE	2.17e-05	TRUE	TCF20	NM_005650 NM_181492 NP_005641 NP_852469 XM_005261722 XM_005261723 XM_005261724 XM_005276955 XM_005276956 XM_005276957 XM_006724313 XM_006724314 XM_006725781 XM_006725782 XM_006725783 XP_005261779 XP_005261780 XP_005261781 XP_005277012 XP_005277013 XP_005277014 XP_006724376 XP_006724377 XP_006725844 XP_006725845 XP_006725846	overlaps exon downstream	inside	98	overlaps exon downstream	0	1	4	overlaps 5' UTR		55426	53964	0	TRUE
398	chr14	76668034	76673686	5653		14.446297	81664.91	3434655	3440307	1401	18086	0.3111526	0.5383146	0.1439206	0.4851613	0.1206211	0.4859559	0.3144974	-1.9031765	-0.1499851	-2.1579676	-0.1476243	-7.754015e-01	2e-07	TRUE	2.17e-05	TRUE	GPATCH2L	NM_017926 NM_017972 NP_060396 NP_060442 NR_110314 XM_006720191 XM_006720192 XM_006720193 XP_006720254 XP_006720255 XP_006720256	NA	NA	0	NA	NA	NA	10	NA		0	0	0	TRUE
399	chr10	98102975	98105901	2927		27.868638	81571.50	4889394	4892320	2174	15982	1.3176302	0.0323592	2.0585636	0.0018643	3.4882941	0.0004393	0.7689476	5.9913185	-4.1174548	6.7522021	-6.2029565	4.570638e+00	2e-07	TRUE	2.17e-05	TRUE	OPALIN	NM_001040102 NM_001040103 NM_001284320 NM_001284321 NM_001284322 NM_001284323 NM_001284324 NM_001284326 NM_001284327 NM_033207 NP_001035191 NP_001035192 NP_001271249 NP_001271250 NP_001271251 NP_001271252 NP_001271253 NP_001271255 NP_001271256 NP_149984 NR_104296 NR_104297	NA	NA	0	NA	NA	NA	5	NA		0	0	0	TRUE
400	chr7	114330202	114334466	4265		19.071375	81339.42	6212544	6216808	2649	6723	0.3550666	0.2149355	0.1709080	1.3259769	0.1906283	3.8458627	0.0348022	-0.3306835	2.6250802	-0.1731409	4.1613318	-2.626653e+00	2e-07	TRUE	2.17e-05	TRUE	FOXP2	NM_001172766 NM_001172767 NM_014491 NM_148898 NM_148899 NM_148900 NP_001166237 NP_001166238 NP_055306 NP_683696 NP_683697 NP_683698 NR_033766 NR_033767 XM_006716179 XM_006716180 XP_006716242 XP_006716243 XR_428189	overlaps 3'	overlaps 3'	61607	inside exon	0	12	12	3'UTR		65232	61368	0	TRUE
401	chr1	182612469	182616056	3588		22.649099	81264.97	11969326	11972913	4717	6492	0.5072921	0.1840619	0.1796805	1.2159615	1.2544413	1.6315480	1.4695437	-0.0347571	2.7238345	2.7687819	3.1479784	2.997105e+00	2e-07	TRUE	2.17e-05	TRUE	RGS8	NM_001102450 NM_033345 NP_001095920 NP_203131 XM_005245555 XM_006711597 XP_005245612 XP_006711660	overlaps 3'	overlaps 3'	26011	overlaps exon upstream	0	7	7	overlaps 3'UTR		26275	22914	0	TRUE
402	chr7	13930761	13935774	5014		16.175009	81101.50	959567	964580	395	15842	0.8023439	0.6304600	0.5221974	0.7910694	0.6944285	0.4841065	5.0752957	-0.2718096	0.3273995	0.1394214	-0.3810804	3.009015e+00	2e-07	TRUE	2.17e-05	TRUE	ETV1	NM_001163147 NM_001163148 NM_001163149 NM_001163150 NM_001163151 NM_001163152 NM_004956 NP_001156619 NP_001156620 NP_001156621 NP_001156622 NP_001156623 NP_001156624 NP_004947 XM_005249635 XM_005249636 XP_005249692 XP_005249693	overlaps 3'	overlaps 3'	95276	overlaps exon upstream	0	13	13	3'UTR		100194	82539	0	TRUE
403	chr19	42375413	42376995	1583		51.186944	81028.93	5621676	5623258	1794	3898	1.1717494	2.3776279	0.2637966	2.0223320	0.2558895	2.0332136	1.2837641	-3.1720250	-0.2335031	-3.2159300	-0.2257612	-8.891429e-01	2e-07	TRUE	2.17e-05	TRUE	RPS19	NM_001022 NP_001013	overlaps 3'	overlaps 3'	11425	overlaps exon upstream	0	6	6	overlaps 3'UTR		11496	10600	0	TRUE
404	chr8	41510744	41514106	3363		24.079722	80980.10	2435723	2439085	885	19688	0.1906321	0.0774364	0.1815381	0.0558440	0.0774385	0.2330644	1.7463120	1.2291884	-0.4716084	0.0000389	1.5896451	4.495156e+00	2e-07	TRUE	2.17e-05	TRUE	ANK1	NM_000037 NM_001142445 NM_001142446 NM_020475 NM_020476 NM_020477 NM_020478 NM_020479 NM_020480 NM_020481 NP_000028 NP_001135917 NP_001135918 NP_065208 NP_065209 NP_065210 NP_065211 NP_065213 XM_005273476 XP_005273533	overlaps exon upstream	inside	240174	overlaps exon upstream	0	43	43	overlaps 3'UTR		243536	240752	0	TRUE
405	chr4	126236825	126242746	5922		13.661860	80905.54	5652996	5658917	2450	6739	0.1665487	0.4458277	0.0142023	0.1764854	0.0172121	0.1027944	0.0107757	-4.9722856	-1.3369379	-4.6949899	-2.1167244	-5.370630e+00	2e-07	TRUE	2.17e-05	TRUE	FAT4	NM_024582 NP_078858 XM_005263210 XM_006714304 XP_005263267 XP_006714367	overlaps 5'	overlaps 5'	0	overlaps exon downstream	0	1	17	inside transcription region		176520	175356	0	TRUE
406	chr6	168363109	168365791	2683		30.064256	80662.40	8806627	8809309	3617	9534	1.2344807	2.8464299	0.2832860	1.5922204	0.2658965	1.2496283	0.4637607	-3.3288226	-0.8381135	-3.4202169	-1.1876545	-2.617701e+00	2e-07	TRUE	2.17e-05	TRUE	MLLT4	NM_001040000 NM_001040001 NM_001207008 NM_005936 NP_001035089 NP_001193937 XM_005266996 XM_005266997 XM_006715483 XM_006715484 XM_006715485 XM_006715486 XM_006715487 XM_006715488 XM_006715489 XM_006715490 XM_006715491 XM_006715492 XM_006715493 XM_006715494 XP_005267053 XP_005267054 XP_006715546 XP_006715547 XP_006715548 XP_006715549 XP_006715550 XP_006715551 XP_006715552 XP_006715553 XP_006715554 XP_006715555 XP_006715556 XP_006715557 XR_427971	overlaps 3'	overlaps 3'	48888	overlaps exon upstream	0	15	15	overlaps 3'UTR		50678	48378	0	TRUE
407	chr12	113334452	113336689	2238		35.945255	80445.48	6769964	6772201	2780	11093	3.7624552	0.3020159	7.5867612	0.3574279	3.7527289	0.7435970	2.8027476	4.6507877	0.2430279	3.6352437	1.2998964	3.214145e+00	2e-07	TRUE	2.17e-05	TRUE	RPH3A	NM_001143854 NM_014954 NP_001137326 NP_055769	overlaps 3'	overlaps 3'	28500	overlaps exon upstream	0	14	14	overlaps 3'UTR		30732	26816	0	TRUE
408	chr14	86087479	86094531	7053		11.401110	80412.03	3939448	3946500	1557	12186	1.0246681	1.8760123	0.6635720	1.0898339	0.4042428	0.5508009	0.1122587	-1.4993443	-0.7835610	-2.2143752	-1.7680666	-4.062769e+00	2e-07	TRUE	2.17e-05	TRUE	FLRT2	NM_013231 NP_037363 XM_005267489 XM_005267490 XM_006720095 XP_005267546 XP_005267547 XP_006720158 XR_429303 XR_429304 XR_429305 XR_429306 XR_429307 XR_429308 XR_429309	overlaps 3'	overlaps 3'	90907	overlaps exon upstream	0	2	2	overlaps 3'UTR		97698	1982	0	TRUE
409	chr16	72459571	72465408	5838		13.760191	80332.00	5084786	5090623	1763	44486	0.4543981	0.8006953	0.1795746	0.8239775	0.2948769	0.2672209	0.1411164	-2.1566699	0.0413517	-1.4411404	-1.5832203	-2.504367e+00	2e-07	TRUE	2.17e-05	TRUE	PMFBP1	NM_001160213 NM_031293 NP_001153685 NP_112583 XM_005256187 XM_006721293 XM_006721294 XP_005256244 XP_006721356 XP_006721357 XR_429732	upstream	upstream	253222	NA	NA	NA	22	NA		53353	31470	0	TRUE
410	chr5	175802359	175805817	3459		23.189902	80213.87	8296091	8299549	3543	27721	0.6814485	1.3110989	0.2827464	1.0850524	0.2129416	0.9671734	0.1706326	-2.2131958	-0.2730118	-2.6222471	-0.4389300	-2.941812e+00	2e-07	TRUE	2.17e-05	TRUE	ARL10	NM_173664 NP_775935 XM_005265890 XM_005265891 XP_005265947 XP_005265948	downstream	downstream	9857	NA	NA	NA	4	NA		8001	6331	0	TRUE
411	chr2	145141715	145146020	4306		18.576213	79989.17	7482680	7486985	3257	6003	1.0899454	2.2868326	0.5591877	0.7490229	0.5271956	0.3268108	0.1590528	-2.0319462	-1.6102690	-2.1169404	-2.8068233	-3.845773e+00	2e-07	TRUE	2.17e-05	TRUE	ZEB2	NM_001171653 NM_014795 NP_001165124 NP_055610 NR_033258 XM_006712881 XM_006712882 XP_006712944 XP_006712945	overlaps 3'	overlaps 3'	131938	inside exon	0	6	6	3'UTR		132375	128460	0	TRUE
412	chr7	63808468	63814261	5794		13.761663	79735.07	3156028	3161821	1359	8145	0.1874347	0.3370298	0.0803503	0.3077610	0.0772208	0.3226695	0.0945220	-2.0685015	-0.1310659	-2.1258152	-0.0628189	-1.834154e+00	2e-07	TRUE	2.17e-05	TRUE	ZNF736	NM_001170905 NP_001164376 XM_006716104 XP_006716167	overlaps 3'	overlaps 3'	35282	inside exon	0	5	5	overlaps 3'UTR		36831	34996	0	TRUE
413	chr12	108641158	108644346	3189		24.976555	79650.23	6264274	6267462	2568	19116	0.5203049	0.0829011	0.5663178	0.1992884	0.6960772	0.0854616	3.6314365	2.7721482	1.2653937	3.0697836	0.0438850	5.453005e+00	2e-07	TRUE	2.17e-05	TRUE	WSCD2	NM_014653 NP_055468 XM_006719702 XM_006719703 XM_006719704 XP_006719765 XP_006719766 XP_006719767	overlaps 3'	overlaps 3'	22642	overlaps exon upstream	0	6	6	overlaps 3'UTR		25797	23530	0	TRUE
414	chr1	46685550	46692377	6828		11.654546	79577.24	4784313	4791140	1716	20184	0.1189137	0.0329892	0.1669015	0.0393341	0.1295103	0.0298512	0.4863801	2.3389316	0.2537877	1.9730014	-0.1442024	3.882019e+00	2e-07	TRUE	2.17e-05	TRUE	POMGNT1	NM_001243766 NM_001290129 NM_001290130 NM_017739 NP_001230695 NP_001277058 NP_001277059 NP_060209 XM_005271010 XM_006710755 XM_006710756 XP_005271067 XP_006710818 XP_006710819	overlaps 5'	overlaps 5'	0	inside exon	0	1	23	5' UTR		31624	9102	0	TRUE
415	chr15	60780505	60785870	5366		14.814005	79491.95	2622417	2627782	1237	17329	0.2807703	0.0650820	0.2345403	0.2717282	0.4490752	2.2844651	1.0976785	1.8495049	2.0618333	2.7866260	5.1334535	4.076053e+00	2e-07	TRUE	2.17e-05	TRUE	RORA	NM_002943 NM_134260 NM_134261 NM_134262 NP_002934 NP_599022 NP_599023 NP_599024 XM_005254584 XP_005254641	inside exon	inside	735632	inside exon	0	11	11	3'UTR		741019	731763	0	TRUE
416	chr11	73372358	73373865	1508		52.700072	79471.71	5127672	5129179	1782	19438	9.9418074	0.9166696	15.0014378	1.7374456	23.1668998	1.5212571	10.7631173	4.0325551	0.9224941	4.6595193	0.7307902	3.553550e+00	2e-07	TRUE	2.17e-05	TRUE	PLEKHB1	NM_001130033 NM_001130034 NM_001130035 NM_001130036 NM_021200 NP_001123505 NP_001123506 NP_001123507 NP_001123508 NP_067023 XM_006718641 XP_006718704	overlaps 3'	overlaps 3'	8873	overlaps exon upstream	0	3	3	overlaps 3'UTR		10379	8809	0	TRUE
417	chr5	660335	665415	5081		15.640443	79469.09	100883	105963	31	13138	2.9322303	0.7432265	4.9593304	0.7254610	4.1797226	0.4718700	2.4197306	2.7382715	-0.0349038	2.4915334	-0.6554125	1.702973e+00	2e-07	TRUE	2.17e-05	TRUE	TPPP	NM_007030 NP_008961 XM_005248237 XP_005248294	overlaps exon upstream	inside	28095	overlaps exon upstream	0	4	4	overlaps 3'UTR		33533	12958	0	TRUE
418	chr2	45172482	45175220	2739		28.949448	79292.54	2469727	2472465	1154	19629	0.0559140	0.0083001	0.0010814	0.3586423	0.1150942	0.0062385	0.0032217	-2.9402677	5.4332772	3.7935473	-0.4119345	-1.365294e+00	2e-07	TRUE	2.17e-05	TRUE	SIX3	NM_005413 NP_005404	overlaps 3'	overlaps 3'	3445	inside exon	0	2	2	3'UTR		4179	2655	0	TRUE
419	chr3	49048854	49051549	2696		29.354046	79138.51	3121259	3123954	1247	21812	1.8591347	3.1699695	0.8211686	3.0327338	0.9568757	2.9102729	1.5222036	-1.9487187	-0.0638501	-1.7280656	-0.1233145	-1.058308e+00	2e-07	TRUE	2.17e-05	TRUE	WDR6	NM_018031 NP_060501 XM_005264837 XP_005264894	overlaps exon upstream	inside	3813	overlaps exon upstream	0	2	6	overlaps 5' UTR		8345	3600	0	TRUE
420	chr16	57505886	57507650	1765		44.812290	79093.69	3982966	3984730	1363	6797	1.7342098	3.3825701	0.5094447	3.3380344	0.4548816	2.1077240	1.0172869	-2.7311224	-0.0191210	-2.8945567	-0.6824339	-1.733393e+00	2e-07	TRUE	2.17e-05	TRUE	DOK4	NM_018110 NP_060580 XM_005256042 XM_005256043 XP_005256099 XP_005256100	covers exon(s)	inside	12735	covers exon(s)	0	9	9	overlaps 3'UTR		14515	6130	0	TRUE
421	chr3	141010430	141013478	3049		25.939211	79088.66	7664602	7667650	3158	3701	0.7578162	1.3284056	0.3019976	1.4623717	0.2737877	1.8346938	0.2493094	-2.1370866	0.1386143	-2.2785663	0.4658436	-2.413687e+00	2e-07	TRUE	2.17e-05	TRUE	ACPL2	NM_001037172 NM_001282728 NM_152282 NP_001032249 NP_001269657 NP_689495 XM_005247903 XP_005247960	overlaps exon upstream	inside	28974	overlaps exon upstream	0	5	5	overlaps 3'UTR		32030	30509	0	TRUE
422	chr19	34303592	34306617	3026		26.127391	79061.49	4218466	4221491	1370	4470	0.8612947	1.4953790	0.4213749	1.3408606	0.3550477	1.6237999	0.4690190	-1.8273348	-0.1573519	-2.0744266	0.1188627	-1.672793e+00	2e-07	TRUE	2.17e-05	TRUE	KCTD15	NM_001129994 NM_001129995 NM_024076 NP_001123466 NP_001123467 NP_076981	overlaps exon upstream	inside	14186	overlaps exon upstream	0	6	6	overlaps 3'UTR		17260	12493	0	TRUE
423	chr11	46404355	46408138	3784		20.891941	79055.10	2697171	2700954	1054	31235	0.5270419	0.4962355	0.3266825	1.3330335	0.4750757	1.5754368	0.4414542	-0.6031356	1.4256163	-0.0628674	1.6666552	-1.687609e-01	2e-07	TRUE	2.17e-05	TRUE	MDK	NM_001012333 NM_001012334 NM_001270550 NM_001270551 NM_001270552 NM_002391 NP_001012333 NP_001012334 NP_001257479 NP_001257480 NP_001257481 NP_002382 NR_073039	overlaps 3'	overlaps 3'	1094	overlaps exon upstream	0	4	4	overlaps 3'UTR		2126	1436	0	TRUE
424	chr7	94292643	94297609	4967		15.913807	79043.88	4761015	4765981	2089	6359	3.9220731	5.4285189	1.5510374	9.7066427	2.4047147	6.2996471	4.6645217	-1.8073252	0.8384138	-1.1746929	0.2147124	-2.188295e-01	2e-07	TRUE	2.17e-05	TRUE	PEG10	NM_001040152 NM_001172437 NM_001172438 NM_001184961 NM_001184962 NM_015068 NP_001035242 NP_001165908 NP_001165909 NP_001171890 NP_001171891 NP_055883	overlaps exon upstream	inside	6961	overlaps exon upstream	0	2	2	overlaps 3'UTR		13324	7947	0	TRUE
425	chr20	1959402	1961608	2207		35.785921	78979.53	239318	241524	76	8368	0.9520687	0.1209412	0.2689013	5.1550837	2.0317287	0.0360813	0.0145185	1.1527715	5.4136186	4.0703305	-1.7449822	-3.058339e+00	2e-07	TRUE	2.17e-05	TRUE	PDYN	NM_001190892 NM_001190898 NM_001190899 NM_001190900 NM_024411 NP_001177821 NP_001177827 NP_001177828 NP_001177829 NP_077722	overlaps exon upstream	inside	13323	overlaps exon upstream	0	3	3	overlaps 3'UTR		15529	2761	0	TRUE
426	chr19	10795091	10796442	1352		58.337408	78872.18	1800723	1802074	534	15240	1.8784246	3.5557676	0.5451756	3.5791075	0.6023872	3.8215416	1.1816628	-2.7053682	0.0094388	-2.5613980	0.1039937	-1.589343e+00	2e-07	TRUE	2.17e-05	TRUE	ILF3	NM_001137673 NM_004516 NM_012218 NM_017620 NM_153464 NP_001131145 NP_004507 NP_036350 NP_060090 NP_703194 XM_005259895 XM_006722742 XP_005259952 XP_006722805	overlaps 3'	overlaps 3'	7252	inside exon	0	13	13	3'UTR		8602	6707	0	TRUE
427	chr3	26754640	26759069	4430		17.798428	78847.04	1517375	1521804	565	8070	0.1874172	0.3217372	0.0505204	0.2029417	0.0538162	1.0144676	0.5735196	-2.6709448	-0.6648175	-2.5797710	1.6567683	8.339603e-01	2e-07	TRUE	2.17e-05	TRUE	LRRC3B	NM_052953 NP_443185 XM_005264847 XM_005264849 XM_005264850 XM_006712959 XP_005264904 XP_005264906 XP_005264907 XP_006713022	downstream	downstream	90340	NA	NA	NA	2	NA		87965	779	0	TRUE
428	chr5	158123736	158126154	2419		32.570606	78788.30	7539160	7541578	3181	18256	0.2255088	0.0440205	0.0534263	1.0890580	0.0797246	2.7353269	0.6225138	0.2793760	4.6287627	0.8568503	5.9573952	3.821860e+00	2e-07	TRUE	2.17e-05	TRUE	EBF1	NM_024007 NP_076870 XM_005265832 XM_005265833 XM_005265834 XM_006714827 XP_005265889 XP_005265890 XP_005265891 XP_006714890	overlaps exon upstream	inside	400634	overlaps exon upstream	0	16	16	overlaps 3'UTR		403865	400325	0	TRUE
429	chr9	94171333	94173190	1858		42.215480	78436.36	3070511	3072368	1392	1861	1.1560486	2.3281692	0.3856727	1.7255506	0.3398311	1.5964439	0.7657102	-2.5937468	-0.4321392	-2.7763063	-0.5443340	-1.604326e+00	2e-07	TRUE	2.17e-05	TRUE	NFIL3	NM_001289999 NM_001290000 NM_005384 NP_001276928 NP_001276929 NP_005375 XM_005251999 XM_005252000 XP_005252056 XP_005252057	overlaps exon upstream	inside	12954	overlaps exon upstream	0	2	2	overlaps 5' UTR		14817	1388	0	TRUE
430	chr17	61666360	61669710	3351		23.405027	78430.24	5821181	5824531	2161	5261	1.8884136	3.3884477	0.8282070	3.0805436	0.7584229	3.0120979	1.0203054	-2.0325612	-0.1374396	-2.1595502	-0.1698559	-1.731623e+00	2e-07	TRUE	2.17e-05	TRUE	DCAF7	NM_001003725 NM_005828 NP_005819 NR_073585	overlaps exon upstream	inside	38564	overlaps exon upstream	0	3	3	overlaps 3'UTR		43846	38495	0	TRUE
431	chr1	6307412	6310686	3275		23.912236	78312.57	709395	712669	208	16780	1.0191234	1.7520293	0.3636685	2.0304059	0.7537889	0.8813352	0.1717194	-2.2683309	0.2127412	-1.2167945	-0.9912641	-3.350902e+00	2e-07	TRUE	2.17e-05	TRUE	GPR153	NM_207370 NP_997253	covers exon(s)	inside	10349	covers exon(s)	0	6	6	overlaps 3'UTR		13629	5567	0	TRUE
432	chr3	194788136	194790845	2710		28.893209	78300.60	10097651	10100360	4259	5267	0.5789493	0.9935551	0.2450925	1.0509972	0.2289817	1.1526057	0.3949859	-2.0192734	0.0810871	-2.1173679	0.2142272	-1.330799e+00	2e-07	TRUE	2.17e-05	TRUE	XXYLT1	NM_152531 NP_689744 XM_005269282 XM_005269283 XM_005269284 XM_005269285 XM_005269286 XM_005269287 XM_005269288 XM_006713511 XM_006713512 XP_005269339 XP_005269340 XP_005269341 XP_005269342 XP_005269343 XP_005269344 XP_005269345 XP_006713574 XP_006713575	overlaps 3'	overlaps 3'	201050	overlaps exon upstream	0	4	4	overlaps 3'UTR		202882	201343	0	TRUE
433	chr18	44249989	44260473	10485		7.458362	78200.93	1902131	1912615	914	25141	0.2802512	0.0914554	0.4305906	0.2036118	0.1576560	0.1664387	0.8537764	2.2351766	1.1546810	0.7856394	0.8638508	3.222718e+00	2e-07	TRUE	2.17e-05	TRUE	ST8SIA5	NM_013305 NP_037437 XM_005258250 XM_006722443 XM_006722444 XP_005258307 XP_006722506 XP_006722507	overlaps 3'	overlaps 3'	76566	inside exon	0	6	6	overlaps 3'UTR		77958	76466	0	TRUE
434	chr1	244214942	244218682	3741		20.872359	78083.49	15530513	15534253	6194	10830	4.6698145	10.5911509	1.5085367	3.2879352	0.8777142	3.5893287	6.4192649	-2.8116376	-1.6876056	-3.5929643	-1.5610734	-7.223794e-01	2e-07	TRUE	2.17e-05	TRUE	ZBTB18	NM_001278196 NM_006352 NM_205768 NP_001265125 NP_006343 NP_991331 XM_005273006 XP_005273063	overlaps 5'	overlaps 5'	0	inside exon	0	1	1	overlaps 3'UTR		4273	1568	0	TRUE
435	chr5	170732992	170735422	2431		32.024825	77852.35	7995742	7998172	3407	20221	0.0152650	0.0000678	0.0005751	0.0003280	0.0005351	0.1863137	0.2836977	3.0854131	2.2751831	2.9814485	11.4252099	1.203183e+01	2e-07	TRUE	2.17e-05	TRUE	TLX3	NM_021025 NP_066305	promoter	promoter	866	NA	NA	NA	3	NA		2850	2233	0	TRUE
436	chr14	73075742	73081442	5701		13.653758	77840.07	3034336	3040036	1210	10951	0.1467744	0.1839395	0.0525746	0.1521268	0.0778790	0.6512730	0.7740823	-1.8067936	-0.2739564	-1.2399240	1.8240312	2.073256e+00	2e-07	TRUE	2.17e-05	TRUE	DPF3	NM_001280542 NM_001280543 NM_001280544 NM_012074 NP_001267471 NP_001267472 NP_001267473 NP_036206 XM_005268109 XP_005268166	downstream	downstream	279367	NA	NA	NA	11	NA		274805	274791	0	TRUE
437	chr2	200133644	200137400	3757		20.713528	77820.73	9956960	9960716	4388	4878	2.5091449	6.7477568	0.8281410	0.6046385	0.1553807	0.2834473	0.0212405	-3.0264597	-3.4802633	-5.4405291	-4.5732556	-8.311448e+00	2e-07	TRUE	2.17e-05	TRUE	SATB2	NM_001172509 NM_001172517 NM_015265 NP_001165980 NP_001165988 NP_056080 XM_005246396 XM_006712372 XP_005246453 XP_006712435	overlaps 3'	overlaps 3'	198589	overlaps exon upstream	0	12	12	overlaps 3'UTR		201766	183826	0	TRUE
438	chr5	88013717	88018745	5029		15.453355	77714.92	3696109	3701137	1632	18347	6.6280438	12.7115759	5.7313225	1.9952096	1.2799410	1.9549521	0.2336927	-1.1492029	-2.6715307	-3.3119937	-2.7009377	-5.765387e+00	2e-07	TRUE	2.17e-05	TRUE	MEF2C	NM_001131005 NM_001193347 NM_001193348 NM_001193349 NM_001193350 NM_002397 NP_001124477 NP_001180276 NP_001180277 NP_001180278 NP_001180279 NP_002388 XM_005248511 XM_006714618 XM_006714619 XM_006714620 XM_006714621 XM_006714622 XM_006714623 XM_006714624 XM_006714625 XP_005248568 XP_006714681 XP_006714682 XP_006714683 XP_006714684 XP_006714685 XP_006714686 XP_006714687 XP_006714688	overlaps 3'	overlaps 3'	181177	overlaps exon upstream	0	11	11	overlaps 3'UTR		185864	101184	0	TRUE
439	chr6	123046269	123047685	1417		54.819220	77678.83	6484676	6486092	2529	8267	0.5218114	0.0477940	0.1709238	0.2391490	0.3610986	0.1762567	8.4464882	1.8384517	2.3230081	2.9174912	1.8827763	7.465378e+00	2e-07	TRUE	2.17e-05	TRUE	PKIB	NM_001270393 NM_001270394 NM_001270395 NM_032471 NM_181794 NM_181795 NP_001257322 NP_001257323 NP_001257324 NP_115860 NP_861459 NP_861460	overlaps 3'	overlaps 3'	7356	overlaps exon upstream	0	2	2	overlaps 3'UTR		8605	7400	0	TRUE
440	chr7	30197052	30202382	5331		14.544700	77537.80	1690216	1695546	767	5331	14.4916989	7.1853892	20.1884361	6.2556210	23.3760332	5.4828523	10.6006036	1.4903909	-0.1999132	1.7018919	-0.3901397	5.610082e-01	2e-07	TRUE	2.17e-05	TRUE	MTURN	NM_152793 NP_690006 XM_005249652 XP_005249709	overlaps 3'	overlaps 3'	22500	overlaps exon upstream	0	3	3	overlaps 3'UTR		27829	22411	0	TRUE
441	chr1	69103619	69106313	2695		28.753634	77491.04	6061891	6064585	2405	4685	0.0176549	0.0006336	0.0021020	0.0035315	0.1227646	0.0013517	0.0023845	1.7301022	2.4786477	7.5981087	1.0931429	1.912036e+00	2e-07	TRUE	2.17e-05	TRUE	DEPDC1	NM_001114120 NM_017779 NP_001107592 NP_060249	upstream	upstream	140820	NA	NA	NA	11	NA		22964	20067	0	TRUE
442	chr9	85860571	85863432	2862		26.965270	77174.60	2622153	2625014	1172	3891	0.5284315	1.2212131	0.1397610	0.6496448	0.1273375	0.3481831	0.1071563	-3.1272808	-0.9105919	-3.2615855	-1.8103970	-3.510526e+00	2e-07	TRUE	2.17e-05	TRUE	FRMD3	NM_001244959 NM_001244960 NM_001244961 NM_001244962 NM_174938 NP_001231888 NP_001231889 NP_001231890 NP_001231891 NP_777598 XM_005251882 XP_005251939	overlaps exon upstream	inside	289916	overlaps exon upstream	0	14	14	overlaps 3'UTR		293809	290313	0	TRUE
443	chr12	21417557	21422705	5149		14.968506	77072.84	1446946	1452094	576	10949	0.4142693	0.0325131	0.6528377	0.0435999	0.9819105	0.0355434	0.2632049	4.3276333	0.4233043	4.9165004	0.1285616	3.017095e+00	2e-07	TRUE	2.17e-05	TRUE	SLCO1A2	NM_005075 NM_021094 NM_134431 NP_066580 NP_602307 XM_005253474 XM_005253477 XM_005253478 XP_005253531 XP_005253534 XP_005253535	overlaps exon upstream	inside	125666	overlaps exon upstream	0	14	14	overlaps 3'UTR		130837	37379	0	TRUE
444	chr7	155191349	155194612	3264		23.592792	77006.87	8441117	8444380	3576	8889	0.0522926	0.0016827	0.0450362	0.0041341	0.0504403	0.2439400	0.5416111	4.7422215	1.2967843	4.9057125	7.1795908	8.330322e+00	2e-07	TRUE	2.17e-05	TRUE	EN2	NM_001427 NP_001418	upstream	upstream	56212	NA	NA	NA	2	NA		6702	4309	0	TRUE
445	chr16	87440061	87443946	3886		19.797260	76932.15	5997625	6001510	2152	17218	1.0432086	1.8247179	0.4604455	1.6363633	0.4196426	1.7292982	1.0108308	-1.9865710	-0.1571803	-2.1204403	-0.0774867	-8.521318e-01	2e-07	TRUE	2.17e-05	TRUE	ZCCHC14	NM_015144 NP_055959 XM_005255858 XP_005255915 XR_243401	NA	NA	0	NA	NA	NA	14	NA		0	0	0	TRUE
446	chr19	2428180	2430956	2777		27.686072	76884.22	495445	498221	133	11801	1.0027973	1.6563963	0.3422321	2.3442121	0.3183498	2.1087818	0.8335707	-2.2750007	0.5010552	-2.3793629	0.3483620	-9.906715e-01	2e-07	TRUE	2.17e-05	TRUE	LMNB2	NM_032737 NP_116126	overlaps exon upstream	inside	26010	overlaps exon upstream	0	12	12	overlaps 3'UTR		28803	26022	0	TRUE
447	chr9	130702884	130705532	2649		28.945617	76676.94	5587467	5590115	2484	19177	1.2169112	0.3139260	1.7547485	0.4330185	2.4597214	0.5874643	1.0927660	2.4827680	0.4640044	2.9699987	0.9040768	1.799488e+00	2e-07	TRUE	2.17e-05	TRUE	FAM102A	NM_001035254 NM_203305 NP_001030331 NP_976050 XM_005251984 XP_005252041	overlaps 3'	overlaps 3'	4972	inside exon	0	5	5	3'UTR		7344	856	0	TRUE
448	chr2	151324739	151326757	2019		37.907479	76535.20	7676572	7678590	3314	7811	2.0500050	4.0644363	0.3882221	5.1071272	0.3229575	2.8800106	0.4001359	-3.3881010	0.3294567	-3.6536393	-0.4969812	-3.344494e+00	2e-07	TRUE	2.17e-05	TRUE	RND3	NM_001254738 NM_005168 NP_001241667 NP_005159	overlaps 3'	overlaps 3'	17452	overlaps exon upstream	0	5	5	overlaps 3'UTR		18452	17425	0	TRUE
449	chr4	153895827	153900797	4971		15.375366	76430.94	6532591	6537561	2887	7269	0.1665895	0.3155796	0.0189989	0.3261898	0.0790132	0.2016800	0.3193106	-4.0540146	0.0477078	-1.9978385	-0.6459356	1.695650e-02	2e-07	TRUE	2.17e-05	TRUE	FHDC1	NM_033393 NP_203751 XM_005263319 XM_006714393 XM_006714394 XP_005263376 XP_006714456 XP_006714457	inside exon	inside	31692	inside exon	0	11	11	overlaps 3'UTR		36713	33665	0	TRUE
450	chr19	58488462	58491647	3186		23.959735	76335.72	8418776	8421961	2631	3186	0.4300089	0.8128844	0.1396012	0.7576298	0.1469683	0.7985934	0.2900238	-2.5417390	-0.1015572	-2.4675454	-0.0255891	-1.486879e+00	2e-07	TRUE	2.17e-05	TRUE	ZNF606	NM_025027 NP_079303 XM_005259276 XM_005259277 XP_005259333 XP_005259334	inside exon	inside	23067	inside exon	0	6	6	overlaps 3'UTR		26273	10327	0	TRUE
451	chr15	45462316	45465028	2713		28.108407	76258.11	1751500	1754212	764	42616	0.4979542	0.8322625	0.1515943	0.6336615	0.1382823	1.0247591	1.8682969	-2.4568228	-0.3933262	-2.5894217	0.3001742	1.166613e+00	2e-07	TRUE	2.17e-05	TRUE	SHF	NM_138356 NP_612365 XM_005254765 XM_005254767 XM_005254769 XM_005254770 XM_005254771 XM_006720740 XM_006720741 XM_006720742 XP_005254822 XP_005254824 XP_005254826 XP_005254827 XP_005254828 XP_006720803 XP_006720804 XP_006720805	overlaps 3'	overlaps 3'	14871	covers exon(s)	0	6	6	overlaps 3'UTR		15868	6282	0	TRUE
452	chr3	48784514	48789151	4638		16.423222	76170.90	3072638	3077275	1230	5726	0.5317619	0.8563359	0.2932607	0.8288033	0.2586999	1.0011532	0.3441993	-1.5459928	-0.0471469	-1.7268972	0.2254141	-1.314933e+00	2e-07	TRUE	2.17e-05	TRUE	PRKAR2A	NM_004157 NP_004148 XM_005265313 XM_005265314 XM_005265315 XP_005265370 XP_005265371 XP_005265372 XR_427280	overlaps 3'	overlaps 3'	96119	inside exon	0	10	10	overlaps 3'UTR		97177	96011	0	TRUE
453	chr3	44686359	44689959	3601		21.083515	75921.74	2619541	2623141	1046	10805	0.3481944	0.6650149	0.1262110	0.5662874	0.1244681	0.5242337	0.2037355	-2.3975496	-0.2318524	-2.4176105	-0.3431765	-1.706689e+00	2e-07	TRUE	2.17e-05	TRUE	ZNF197	NM_001024855 NM_006991 NP_001020026 NP_008922 XM_005264783 XM_006712915 XP_005264840 XP_006712978	overlaps exon upstream	inside	19848	overlaps exon upstream	0	6	6	overlaps 3'UTR		23452	17370	0	TRUE
454	chrX	117028636	117033363	4728		16.056696	75916.06	4286946	4291673	1750	7276	0.2884820	0.2425884	0.0881130	1.0744692	0.3791628	0.6324677	0.1601162	-1.4610844	2.1470416	0.6443069	1.3824812	-5.993910e-01	2e-07	TRUE	2.17e-05	TRUE	KLHL13	NM_001168299 NM_001168300 NM_001168301 NM_001168302 NM_001168303 NM_033495 NP_001161771 NP_001161772 NP_001161773 NP_001161774 NP_001161775 NP_277030	overlaps 3'	overlaps 3'	217940	overlaps exon upstream	0	8	8	overlaps 3'UTR		219527	129565	0	TRUE
455	chr11	133766375	133777764	11390		6.657798	75832.32	8697701	8709090	3238	35734	0.3461277	0.2480255	0.3020059	0.5981847	0.2511286	0.8063374	0.9810077	0.2840881	1.2701024	0.0179377	1.7008950	1.983776e+00	2e-07	TRUE	2.17e-05	TRUE	MIR4697HG	NM_001001873 NR_024344	NA	NA	0	NA	NA	NA	1	NA		0	0	0	TRUE
456	chr9	133759354	133763026	3673		20.584036	75605.17	6051903	6055575	2628	10409	1.0330971	1.6087750	0.5303070	1.7707790	0.6721739	1.8191914	0.5609901	-1.6010629	0.1384216	-1.2590561	0.1773348	-1.519915e+00	2e-07	TRUE	2.17e-05	TRUE	ABL1	NM_005157 NM_007313 NP_005148 NP_009297	overlaps exon upstream	inside	48523	overlaps exon upstream	0	11	11	overlaps 3'UTR		52231	50236	0	TRUE
457	chr3	78645110	78648084	2975		25.396588	75554.85	4866192	4869166	1889	4355	1.3014628	2.3968635	0.3618392	2.8326482	0.6184288	1.2456701	0.4422311	-2.7277270	0.2410037	-1.9544682	-0.9442257	-2.438275e+00	2e-07	TRUE	2.17e-05	TRUE	ROBO1	NM_001145845 NM_002941 NM_133631 NP_001139317 NP_002932 NP_598334 XM_006713276 XM_006713277 XM_006713278 XP_006713339 XP_006713340 XP_006713341	overlaps 3'	overlaps 3'	1168975	overlaps exon upstream	0	31	31	overlaps 3'UTR		1170671	990998	0	TRUE
458	chr9	77300378	77308081	7704		9.795029	75460.90	2331417	2339120	1055	7704	0.5987459	0.9890019	0.6162829	0.2139282	0.1611372	0.2123170	0.0284778	-0.6823806	-2.2088466	-2.6176836	-2.2197536	-5.118065e+00	2e-07	TRUE	2.17e-05	TRUE	RORB	NM_006914 NP_008845	overlaps 3'	overlaps 3'	69911	overlaps exon upstream	0	10	10	overlaps 3'UTR		71650	70018	0	TRUE
459	chr13	52387476	52391249	3774		19.963262	75341.35	1942522	1946295	913	13220	0.0458389	0.0190658	0.0217992	0.0488348	0.1874083	0.0242013	0.0277732	0.1932936	1.3569242	3.2971290	0.3441008	5.427113e-01	2e-07	TRUE	2.17e-05	TRUE	LINC00282	NM_178515 NR_027047 NR_027048	overlaps 3'	overlaps 3'	28037	inside exon	0	5	5	overlaps 3'UTR		31803	21779	0	TRUE
460	chr2	234378013	234380742	2730		27.517767	75123.51	12031928	12034657	5329	26477	1.0828016	1.9693566	0.3729990	1.5847544	0.4149919	1.6669414	1.8529611	-2.4004808	-0.3134651	-2.2465692	-0.2405210	-8.789180e-02	2e-07	TRUE	2.17e-05	TRUE	DGKD	NM_003648 NM_152879 NP_003639 NP_690618 XM_005246107 XM_005246108 XM_005246109 XM_005246110 XP_005246164 XP_005246165 XP_005246166 XP_005246167 XR_427118 XR_427119	NA	NA	0	NA	NA	NA	23	NA		0	0	0	TRUE
461	chr17	27075466	27077960	2495		30.065972	75014.60	2422153	2424647	907	6931	0.9059940	1.7741348	0.3138684	1.4256105	0.3725584	1.3423138	0.3239071	-2.4988839	-0.3155357	-2.2515770	-0.4023937	-2.453464e+00	2e-07	TRUE	2.17e-05	TRUE	TRAF4	NM_004295 NM_145751 NP_004286	covers exon(s)	inside	4443	covers exon(s)	0	7	7	overlaps 3'UTR		6953	5464	0	TRUE
462	chr16	613220	614376	1157		64.725781	74887.73	142401	143557	46	11060	0.1202848	0.0005750	0.0024195	0.0013890	0.0047627	0.4790591	2.5855180	2.0731507	1.2724937	3.0502460	9.7025198	1.213470e+01	2e-07	TRUE	2.17e-05	TRUE	C16orf11	NM_145270 NP_660313 XM_005255130 XM_005255131 XM_006720849 XP_005255187 XP_005255188 XP_006720912	overlaps exon upstream	inside	2798	overlaps exon upstream	0	2	3	overlaps 5' UTR		5107	2012	0	TRUE
463	chr12	3594686	3598788	4103		18.244489	74857.14	321317	325419	120	9094	0.0853869	0.0713234	0.0536154	0.0636723	0.0693422	1.2636123	0.1873970	-0.4117288	-0.1637090	-0.0406403	4.1470352	1.393651e+00	2e-07	TRUE	2.17e-05	TRUE	PRMT8	NM_001256536 NM_001256537 NM_019854 NP_001243465 NP_062828 NR_046301 XM_006718986 XP_006719049	inside intron	inside	104171	inside intron	50984	2	10	inside transcription region		212623	211787	0	TRUE
464	chr11	113276473	113279231	2759		27.068817	74682.87	7127203	7129961	2687	14421	0.0207796	0.0020576	0.0035109	0.0590485	0.0947222	0.0031067	0.0017118	0.7708550	4.8428561	5.5246594	0.5944187	-2.654571e-01	2e-07	TRUE	2.17e-05	TRUE	DRD2	NM_000795 NM_016574 NP_000786 NP_057658 XM_005271425 XM_006718774 XP_005271482 XP_006718837	downstream	downstream	16173	NA	NA	NA	7	NA		15087	13924	0	TRUE
465	chr6	13977139	13980416	3278		22.779592	74671.50	765689	768966	296	8527	1.1212550	2.3682679	0.3472599	1.4561453	0.3763767	1.0656576	0.7433553	-2.7697446	-0.7016779	-2.6535829	-1.1520883	-1.671709e+00	2e-07	TRUE	2.17e-05	TRUE	RNF182	NM_001165032 NM_001165033 NM_001165034 NM_152737 NP_001158504 NP_001158505 NP_001158506 NP_689950	overlaps 3'	overlaps 3'	51715	overlaps exon upstream	0	2	2	overlaps 3'UTR		54816	743	0	TRUE
466	chr6	37598454	37606091	7638		9.772493	74642.30	2752123	2759760	1008	30937	0.3409240	0.4674213	0.1580055	0.2922980	0.1415897	0.9762419	1.6262701	-1.5647485	-0.6772833	-1.7230068	1.0625153	1.798771e+00	2e-07	TRUE	2.17e-05	TRUE	MDGA1	NM_153487 NP_705691 XM_006715056 XM_006715057 XP_006715119 XP_006715120	overlaps 3'	overlaps 3'	9009	overlaps exon upstream	0	7	7	overlaps 3'UTR		10409	8169	0	TRUE
467	chr9	19507452	19513142	5691		13.115526	74640.46	853246	858936	423	13610	1.2566030	0.3098905	2.1432160	0.1231521	1.8554433	0.1590828	1.2089911	2.7899470	-1.3313174	2.5819337	-0.9619808	1.963973e+00	2e-07	TRUE	2.17e-05	TRUE	SLC24A2	NM_001193288 NM_020344 NP_001180217 NP_065077 XM_005251425 XM_005251426 XM_006716750 XP_005251482 XP_005251483 XP_006716813	inside exon	inside	273875	inside exon	0	9	9	3'UTR		279567	270713	0	TRUE
468	chr10	43084589	43090147	5559		13.414722	74572.44	2057831	2063389	944	9013	0.4113725	0.7299708	0.1831647	0.6283729	0.1710774	0.7387094	0.3140508	-1.9946970	-0.2162178	-2.0931894	0.0171682	-1.216841e+00	2e-07	TRUE	2.17e-05	TRUE	ZNF33B	NM_006955 NP_008886 XM_005271825 XM_006717964 XM_006717965 XM_006717966 XM_006717967 XM_006717968 XP_005271882 XP_006718027 XP_006718028 XP_006718029 XP_006718030 XP_006718031	inside exon	inside	43845	inside exon	0	6	6	overlaps 5' UTR		49437	2000	0	TRUE
469	chr2	136871917	136873484	1568		47.532227	74530.53	7282713	7284280	3153	3791	0.9993466	1.3363363	0.1545463	3.4688195	0.2573290	7.6309530	0.3939088	-3.1121724	1.3761617	-2.3765971	2.5135801	-1.762349e+00	2e-07	TRUE	2.17e-05	TRUE	CXCR4	NM_001008540 NM_003467 NP_001008540 NP_003458	overlaps 3'	overlaps 3'	2241	overlaps exon upstream	0	2	2	overlaps 3'UTR		3806	3191	0	TRUE
470	chr12	63037793	63042417	4625		16.078679	74363.89	4114298	4118922	1484	11340	0.8629805	0.2326054	1.2106668	0.3147313	1.0641843	1.2217569	2.7989518	2.3798455	0.4362360	2.1937915	2.3930008	3.588930e+00	2e-07	TRUE	2.17e-05	TRUE	PPM1H	NM_020700 NP_065751	overlaps exon upstream	inside	286248	overlaps exon upstream	0	10	10	overlaps 3'UTR		290902	286247	0	TRUE
471	chr17	78440632	78444839	4208		17.650605	74273.75	7485692	7489899	2742	9762	2.9736360	0.8849330	4.6044635	0.3762770	2.6507951	0.8567100	11.0017326	2.3793929	-1.2337731	1.5827850	-0.0467613	3.636019e+00	2e-07	TRUE	2.17e-05	TRUE	NPTX1	NM_002522 NP_002513	overlaps 3'	overlaps 3'	5565	overlaps exon upstream	0	5	5	overlaps 3'UTR		9771	5633	0	TRUE
472	chr6	52267960	52272475	4516		16.423540	74168.71	3688309	3692824	1308	8715	1.5636905	0.4043594	2.3818459	0.6443346	2.5824346	0.9492778	1.7133773	2.5583701	0.6721720	2.6750218	1.2311923	2.083133e+00	2e-07	TRUE	2.17e-05	TRUE	PAQR8	NM_133367 NP_588608	inside exon	inside	41034	inside exon	0	2	2	overlaps 3'UTR		45649	1064	0	TRUE
473	chr22	35947546	35950050	2505		29.571998	74077.86	1894325	1896829	689	3463	1.3655497	0.2302104	1.4733650	0.7099921	4.7582306	0.2665840	0.1570989	2.6780900	1.6248500	4.3694004	0.2116371	-5.512794e-01	2e-07	TRUE	2.17e-05	TRUE	RASD2	NM_014310 NP_055125 XM_005261441 XM_005261442 XM_005261443 XP_005261498 XP_005261499 XP_005261500	overlaps 3'	overlaps 3'	4725	overlaps exon upstream	0	2	2	overlaps 3'UTR		7224	5222	0	TRUE
474	chr12	4409022	4414503	5482		13.503349	74025.36	371944	377425	143	5482	2.6182917	3.6817039	1.8082393	4.9890224	1.0957903	3.9641580	0.8505124	-1.0257880	0.4383835	-1.7484019	0.1066409	-2.113969e+00	2e-07	TRUE	2.17e-05	TRUE	CCND2	NM_001759 NP_001750 XM_005253813 XP_005253870	overlaps exon upstream	inside	26120	overlaps exon upstream	0	5	5	overlaps 3'UTR		31620	25968	0	TRUE
475	chr16	73264788	73267016	2229		33.193389	73988.06	5164072	5166300	1781	15379	0.0384228	0.0080016	0.0162881	0.2297594	0.0395991	0.0062007	0.0030753	1.0254566	4.8436866	2.3071024	-0.3678554	-1.379584e+00	2e-07	TRUE	2.17e-05	TRUE	HCCAT5	NM_001101347 NR_027756	NA	NA	0	NA	NA	NA	3	NA		0	0	0	TRUE
476	chr15	64458425	64464187	5763		12.825955	73915.98	2883368	2889130	1327	20167	0.2292522	0.4044816	0.1044691	0.3597717	0.1045484	0.3496272	0.1390356	-1.9529983	-0.1689923	-1.9519024	-0.2102566	-1.540619e+00	2e-07	TRUE	2.17e-05	TRUE	CSNK1G1	NM_022048 NP_071331	inside intron	inside	184255	inside intron	146	13	13	inside transcription region		190510	134521	0	TRUE
477	chr8	20103694	20107879	4186		17.651681	73889.94	1140915	1145100	410	9138	1.4741635	2.8196160	0.8874854	1.2085644	0.8596209	0.2501628	0.1174890	-1.6677033	-1.2222043	-1.7137262	-3.4945596	-4.584901e+00	2e-07	TRUE	2.17e-05	TRUE	LZTS1	NM_021020 NP_066300 XM_005273394 XM_006716281 XP_005273451 XP_006716344	overlaps 3'	overlaps 3'	4924	covers exon(s)	0	4	4	inside transcription region		5570	5459	0	TRUE
478	chr15	66187485	66191343	3859		19.146163	73885.04	3093362	3097220	1421	35272	0.1549174	0.1402498	0.0783013	0.0627432	0.1718660	0.1826461	1.1274789	-0.8408898	-1.1604684	0.2932852	0.3810525	3.007030e+00	2e-07	TRUE	2.17e-05	TRUE	MEGF11	NM_032445 NP_115821 XM_006720722 XP_006720785	overlaps 3'	overlaps 3'	354732	overlaps exon upstream	0	22	22	overlaps 3'UTR		355009	229674	0	TRUE
479	chr10	93666374	93669061	2688		27.464542	73824.69	4569449	4572136	2012	3075	0.8167379	1.6653262	0.2015691	1.5909043	0.1550044	1.9266284	0.1353072	-3.0464582	-0.0659577	-3.4254235	0.2102736	-3.621494e+00	2e-07	TRUE	2.17e-05	TRUE	FGFBP3	NM_152429 NP_689642	overlaps exon upstream	inside	197	overlaps exon upstream	0	2	2	overlaps 5' UTR		2913	776	0	TRUE
480	chr21	46710381	46716388	6008		12.263457	73678.85	1819390	1825397	711	15276	0.6925734	1.1601713	0.3356932	1.1369644	0.3522202	1.1709630	0.4087884	-1.7891225	-0.0291507	-1.7197881	0.0133577	-1.504911e+00	2e-07	TRUE	2.17e-05	TRUE	LOC642852	NR_026943	NA	NA	0	NA	NA	NA	3	NA		0	0	0	TRUE
481	chr20	36031569	36033820	2252		32.554415	73312.54	2385681	2387932	946	21725	1.5557627	2.8663653	0.6513302	2.5520428	0.6648630	2.0528673	0.5739563	-2.1377615	-0.1675700	-2.1080935	-0.4815821	-2.320210e+00	2e-07	TRUE	2.17e-05	TRUE	SRC	NM_005417 NM_198291 NP_005408 NP_938033	overlaps exon upstream	inside	57012	overlaps exon upstream	0	14	14	overlaps 3'UTR		59264	19225	0	TRUE
482	chr15	64973891	64977356	3466		21.136923	73260.58	2919021	2922486	1351	14210	0.8845307	1.5558784	0.3999117	1.4209812	0.3890510	1.2720917	0.5891391	-1.9599759	-0.1308419	-1.9996983	-0.2905266	-1.401049e+00	2e-07	TRUE	2.17e-05	TRUE	ZNF609	NM_015042 NP_055857	inside exon	inside	182272	inside exon	0	9	9	3'UTR		186647	181962	0	TRUE
483	chr17	647614	652112	4499		16.271697	73206.37	60509	65007	25	16860	0.2778025	0.4685937	0.1287231	0.4692161	0.1145870	0.4676080	0.2453211	-1.8640667	0.0019148	-2.0318949	-0.0030380	-9.336665e-01	2e-07	TRUE	2.17e-05	TRUE	GEMIN4	NM_015721 NP_056536 XM_005256667 XM_005256668 XM_005256670 XP_005256724 XP_005256725 XP_005256727	overlaps 3'	overlaps 3'	3389	covers exon(s)	0	3	3	overlaps 3'UTR		5630	4916	0	TRUE
484	chr18	65175324	65182747	7424		9.847139	73105.16	2821043	2828466	1327	20344	0.3233031	0.6040760	0.1422954	0.3631613	0.2228238	0.2781685	0.1924276	-2.0858408	-0.7341197	-1.4388270	-1.1187711	-1.650414e+00	2e-07	TRUE	2.17e-05	TRUE	DSEL	NM_032160 NP_115536	overlaps exon upstream	inside	1220	overlaps exon upstream	0	2	2	overlaps 5' UTR		10148	3668	0	TRUE
485	chr1	112998553	113000940	2388		30.509559	72856.83	8257306	8259693	3351	6712	0.6495473	1.3073309	0.2163484	1.0487576	0.1864244	0.9753063	0.2344002	-2.5951958	-0.3179431	-2.8099619	-0.4226971	-2.479579e+00	2e-07	TRUE	2.17e-05	TRUE	CTTNBP2NL	NM_018704 NP_061174 XM_006710769 XM_006710770 XP_006710832 XP_006710833	inside exon	inside	59753	inside exon	0	6	6	overlaps 3'UTR		64986	41246	0	TRUE
486	chr9	109619052	109625642	6591		11.043242	72786.00	4092404	4098994	1837	13120	0.0782214	0.1848984	0.0131438	0.1017281	0.0215360	0.0897557	0.0210793	-3.8142771	-0.8620145	-3.1019079	-1.0426571	-3.132833e+00	2e-07	TRUE	2.17e-05	TRUE	ZNF462	NM_021224 NP_067047 XM_006717209 XM_006717210 XM_006717211 XM_006717212 XM_006717213 XM_006717214 XM_006717215 XM_006717216 XM_006717217 XM_006717218 XP_006717272 XP_006717273 XP_006717274 XP_006717275 XP_006717276 XP_006717277 XP_006717278 XP_006717279 XP_006717280 XP_006717281	overlaps 5'	overlaps 5'	0	overlaps exon downstream	0	1	13	5' UTR		148418	87646	0	TRUE
487	chr2	175193306	175195244	1939		37.471023	72656.31	8893529	8895467	3905	15139	0.0636352	0.0283268	0.0085249	0.4591130	0.0252688	0.0020998	0.0010000	-1.7324126	4.0186091	-0.1648099	-3.7538742	-4.824061e+00	2e-07	TRUE	2.17e-05	TRUE	AC018470.4	NR_038897	NA	NA	0	NA	NA	NA	3	NA		0	0	0	TRUE
488	chr1	225674558	225679066	4509		16.099203	72591.31	14227829	14232337	5632	14223	0.5961305	0.9346451	0.3089767	1.0374419	0.4070442	0.9414980	0.1905147	-1.5969207	0.1505400	-1.1992331	0.0105394	-2.294516e+00	2e-07	TRUE	2.17e-05	TRUE	ENAH	NM_001008493 NM_018212 NP_001008493 NP_060682 XM_005273182 XM_005273187 XM_005273188 XM_005273189 XM_006711786 XM_006711787 XM_006711788 XM_006711789 XM_006711790 XM_006711791 XM_006711792 XM_006711793 XM_006711794 XM_006711795 XM_006711796 XM_006711797 XP_005273239 XP_005273244 XP_005273245 XP_005273246 XP_006711849 XP_006711850 XP_006711851 XP_006711852 XP_006711853 XP_006711854 XP_006711855 XP_006711856 XP_006711857 XP_006711858 XP_006711859 XP_006711860	inside exon	inside	161779	inside exon	0	14	14	3'UTR		166311	154915	0	TRUE
489	chr4	113434680	113437410	2731		26.574235	72574.24	5138045	5140775	2240	15504	0.6310948	1.6039792	0.0147000	1.0736095	0.0305944	0.3228535	0.1587189	-6.7696955	-0.5791861	-5.7122417	-2.3127039	-3.337109e+00	2e-07	TRUE	2.17e-05	TRUE	NEUROG2	NM_024019 NP_076924	overlaps 5'	overlaps 5'	0	overlaps two exons	0	2	2	overlaps 5' UTR		2656	818	0	TRUE
490	chrX	56310745	56315557	4813		15.077197	72566.55	2193081	2197893	990	7199	0.1914757	0.3839248	0.0663648	0.2923970	0.0625062	0.2417100	0.0887137	-2.5323340	-0.3928952	-2.6187524	-0.6675468	-2.113595e+00	2e-07	TRUE	2.17e-05	TRUE	KLF8	NM_001159296 NM_007250 NP_001152768 NP_009181 XM_005261977 XM_005261978 XM_005261979 XM_006724575 XM_006724576 XP_005262034 XP_005262035 XP_005262036 XP_006724638 XP_006724639 XR_244466	overlaps 3'	overlaps 3'	51154	overlaps exon upstream	0	4	4	overlaps 3'UTR		54731	51159	0	TRUE
491	chr9	116929969	116931743	1775		40.870279	72544.75	4596355	4598129	2063	1775	0.0877290	0.0171211	0.0234686	0.0324989	0.0258350	0.1494841	1.4881899	0.4549567	0.9246118	0.5935512	3.1261425	6.441637e+00	2e-07	TRUE	2.17e-05	TRUE	COL27A1	NM_032888 NP_116277 XM_006717308 XM_006717309 XM_006717310 XP_006717371 XP_006717372 XP_006717373 XR_428542	NA	NA	0	NA	NA	NA	58	NA		0	0	0	TRUE
492	chr16	84599200	84600569	1370		52.925282	72507.64	5815197	5816566	2086	1370	5.1648749	10.3067200	1.5842307	7.5498658	2.2748095	8.8932023	2.8733076	-2.7017309	-0.4490624	-2.1797676	-0.2128104	-1.842801e+00	2e-07	TRUE	2.17e-05	TRUE	COTL1	NM_021149 NP_066972	overlaps 3'	overlaps 3'	51100	overlaps exon upstream	0	4	4	overlaps 3'UTR		52465	51069	0	TRUE
493	chr20	45042862	45043660	799		90.562315	72359.29	3070248	3071046	1209	19662	0.1067056	0.0452770	0.0098387	0.0476596	0.0148527	0.0833524	1.8697741	-2.2022341	0.0739890	-1.6080475	0.8804467	5.367943e+00	2e-07	TRUE	2.17e-05	TRUE	ELMO2	NM_022086 NM_133171 NM_182764 NP_573403 NP_877496 XM_005260496 XM_005260497 XM_005260498 XM_005260499 XM_005260500 XM_005260501 XM_005260502 XM_006723854 XM_006723855 XP_005260553 XP_005260554 XP_005260555 XP_005260556 XP_005260557 XP_005260558 XP_005260559 XP_006723917 XP_006723918	inside intron	inside	18044	inside intron	-17873	1	20	5' UTR		67014	18891	0	TRUE
494	chr11	58972146	58975816	3671		19.711043	72359.24	3199202	3202872	1228	3671	1.6641591	2.9943349	0.8474078	2.2315842	0.6764031	2.6274787	0.9170591	-1.8211073	-0.4241674	-2.1462805	-0.1885565	-1.707149e+00	2e-07	TRUE	2.17e-05	TRUE	DTX4	NM_015177 NP_055992 XM_006718483 XP_006718546	overlaps exon upstream	inside	32334	overlaps exon upstream	0	9	9	overlaps 3'UTR		36248	32313	0	TRUE
495	chr1	160057557	160062213	4657		15.504930	72206.46	10485527	10490183	4103	13486	2.0377471	0.9502270	2.8905141	0.8290322	2.4611672	0.7695988	4.0879437	1.6049821	-0.1968441	1.3729986	-0.3041657	2.105031e+00	2e-07	TRUE	2.17e-05	TRUE	IGSF8	NM_001206665 NM_052868 NP_001193594 NP_443100 XM_005245614 XM_006711631 XP_005245671 XP_006711694	overlaps 3'	overlaps 3'	6094	covers exon(s)	0	7	7	overlaps 3'UTR		7171	6649	0	TRUE
496	chrX	136109478	136113520	4043		17.854643	72186.32	5026234	5030276	2129	12338	0.0119985	0.0006066	0.0018831	0.0078116	0.0742778	0.0080068	0.0085719	1.6344281	3.6868918	6.9361394	3.7225031	3.820895e+00	2e-07	TRUE	2.17e-05	TRUE	GPR101	NM_054021 NP_473362	overlaps 3'	overlaps 3'	313	inside exon	0	1	1	inside transcription region		1526	1526	0	TRUE
497	chr3	133098593	133100008	1416		50.973099	72177.91	7238813	7240228	2949	3721	1.4789547	3.6957396	0.3892598	1.0073948	0.3497685	0.6209211	0.4265880	-3.2470577	-1.8752340	-3.4013908	-2.5733812	-3.114948e+00	2e-07	TRUE	2.17e-05	TRUE	TMEM108	NM_001136469 NM_001282865 NM_023943 NP_001129941 NP_001269794 NP_076432 XM_005247725 XM_005247726 XM_005247727 XM_005247728 XP_005247782 XP_005247783 XP_005247784 XP_005247785	inside intron	inside	254922	inside intron	9016	3	4	inside transcription region		272948	166674	0	TRUE
498	chr17	72666230	72669176	2947		24.488544	72167.74	6599001	6601947	2487	28735	0.0383255	0.0018513	0.0323515	0.0028784	0.0306802	0.0105376	0.4741438	4.1272108	0.6366997	4.0506871	2.5089224	8.000630e+00	2e-07	TRUE	2.17e-05	TRUE	RAB37	NM_001006637 NM_001006638 NM_001163989 NM_001163990 NM_175738 NP_001006639 NP_001157461 NP_001157462 NP_783865 XM_005257288 XM_005257289 XP_005257345 XP_005257346	overlaps 5'	overlaps 5'	0	overlaps exon downstream	0	1	9	overlaps 5' UTR		76218	73824	0	TRUE
499	chr11	12264331	12272786	8456		8.523592	72075.49	1102083	1110538	381	50541	0.0928027	0.0178924	0.1449247	0.0062578	0.0560409	0.0193281	0.4991258	3.0178841	-1.5156269	1.6471341	0.1113542	4.801984e+00	2e-07	TRUE	2.17e-05	TRUE	MICAL2	NM_001282663 NM_001282664 NM_001282665 NM_001282666 NM_001282667 NM_001282668 NM_014632 NP_001269592 NP_001269593 NP_001269594 NP_001269595 NP_001269596 NP_001269597 NP_055447 XM_005253249 XM_005253251 XM_006718391 XM_006718392 XM_006718393 XP_005253306 XP_005253308 XP_006718454 XP_006718455 XP_006718456	NA	NA	0	NA	NA	NA	11	NA		0	0	0	TRUE
500	chr1	46977708	46979890	2183		33.007261	72054.85	4839545	4841727	1734	5749	0.0285265	0.0019692	0.0002021	0.1574038	0.0783206	0.0709639	0.0009144	-3.2842674	6.3207245	5.3137179	5.1714120	-1.106665e+00	2e-07	TRUE	2.17e-05	TRUE	DMBX1	NM_147192 NM_172225 NP_671725 NP_757379 XM_006710355 XP_006710418	overlaps 3'	overlaps 3'	5040	overlaps exon upstream	0	4	4	overlaps 3'UTR		7218	5483	0	TRUE